Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3012 |
Symbol | |
ID | 4071567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 3571875 |
End bp | 3572558 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637985031 |
Product | phosphoribosylglycinamide formyltransferase |
Protein accession | YP_592087 |
Protein GI | 94970039 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN |
TIGRFAM ID | [TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000877023 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGTTGAAGG TCCACTCTCA CGCTCACGTC CTCATCCCGA AGAGCTTGTC AGGATTTTGT CCCATTTACA ATAACCGCGT GAAGAACCTC GGCATCCTGC TCTCTGGGCG CGGCTCCAAT TTCGAAGCTA TTGCGGACAA TGTTGCCGCC GGAAAAATCC CGGCACAGAT TTCCGTCGTC ATCTCCAACC GCGCCGATGC GGGGGGAATT GAGTCGGCGA AGCGACGCGG CTTGAATGCG CTGGTCATTC CGTCAAAGGG CGTCCCTCGC GAAGAACACG ATCGGCGAGT TGTAAAGGCG CTGCAGGACC ATGGCGTTGA TCTCATCTGT CTGGCCGGGT ATATGCGGCT GCTGTCGCCG TGGTTCGTAC AGCAGTTTCC GCGACGCATC CTGAATATTC ATCCTTCGCT GCTGCCCGCG TTCCCCGGAC TCGAGGCATC CAAGCAGGCG TTCGACTACG GCGTGAAGGT CAGCGGGTGC ACGGTGCACT TTGTGGATGA GCACCTCGAC CACGGCGACA TCATCGTGCA GAAAGTCGTA CCGGTGCTGG ATAACGATGA CGATCACACG CTGGCGGCGC GCATTTTGGA GCAGGAGCAC ATTGCGTATA GCGAGGCGGT GCGCATCGTG CTTTCAGACA GCTTCAAGGT TGTGGGAAGG CGCGTAGTCG CCACCGCGCA ATAG
|
Protein sequence | MLKVHSHAHV LIPKSLSGFC PIYNNRVKNL GILLSGRGSN FEAIADNVAA GKIPAQISVV ISNRADAGGI ESAKRRGLNA LVIPSKGVPR EEHDRRVVKA LQDHGVDLIC LAGYMRLLSP WFVQQFPRRI LNIHPSLLPA FPGLEASKQA FDYGVKVSGC TVHFVDEHLD HGDIIVQKVV PVLDNDDDHT LAARILEQEH IAYSEAVRIV LSDSFKVVGR RVVATAQ
|
| |