Gene Acid345_3012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3012 
Symbol 
ID4071567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3571875 
End bp3572558 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content58% 
IMG OID637985031 
Productphosphoribosylglycinamide formyltransferase 
Protein accessionYP_592087 
Protein GI94970039 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN 
TIGRFAM ID[TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000877023 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTTGAAGG TCCACTCTCA CGCTCACGTC CTCATCCCGA AGAGCTTGTC AGGATTTTGT 
CCCATTTACA ATAACCGCGT GAAGAACCTC GGCATCCTGC TCTCTGGGCG CGGCTCCAAT
TTCGAAGCTA TTGCGGACAA TGTTGCCGCC GGAAAAATCC CGGCACAGAT TTCCGTCGTC
ATCTCCAACC GCGCCGATGC GGGGGGAATT GAGTCGGCGA AGCGACGCGG CTTGAATGCG
CTGGTCATTC CGTCAAAGGG CGTCCCTCGC GAAGAACACG ATCGGCGAGT TGTAAAGGCG
CTGCAGGACC ATGGCGTTGA TCTCATCTGT CTGGCCGGGT ATATGCGGCT GCTGTCGCCG
TGGTTCGTAC AGCAGTTTCC GCGACGCATC CTGAATATTC ATCCTTCGCT GCTGCCCGCG
TTCCCCGGAC TCGAGGCATC CAAGCAGGCG TTCGACTACG GCGTGAAGGT CAGCGGGTGC
ACGGTGCACT TTGTGGATGA GCACCTCGAC CACGGCGACA TCATCGTGCA GAAAGTCGTA
CCGGTGCTGG ATAACGATGA CGATCACACG CTGGCGGCGC GCATTTTGGA GCAGGAGCAC
ATTGCGTATA GCGAGGCGGT GCGCATCGTG CTTTCAGACA GCTTCAAGGT TGTGGGAAGG
CGCGTAGTCG CCACCGCGCA ATAG
 
Protein sequence
MLKVHSHAHV LIPKSLSGFC PIYNNRVKNL GILLSGRGSN FEAIADNVAA GKIPAQISVV 
ISNRADAGGI ESAKRRGLNA LVIPSKGVPR EEHDRRVVKA LQDHGVDLIC LAGYMRLLSP
WFVQQFPRRI LNIHPSLLPA FPGLEASKQA FDYGVKVSGC TVHFVDEHLD HGDIIVQKVV
PVLDNDDDHT LAARILEQEH IAYSEAVRIV LSDSFKVVGR RVVATAQ