Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3009 |
Symbol | |
ID | 4071564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 3568027 |
End bp | 3568797 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637985028 |
Product | cyclase/dehydrase |
Protein accession | YP_592084 |
Protein GI | 94970036 |
COG category | [S] Function unknown |
COG ID | [COG5637] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000149284 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGACAACC GGAACTCCCG AACTCAAGCT GATGGCTTCA ACTCGCGCCT GCGGCGGATC GAGCCCTGGG CCTCGATCGT CGGAGGCGGC GCTTTAACCG CATTCGGCAT CAGCCGCAAA TCATTGGCCG GGGCTACGAT GGCGGCAGCC GGCGGCTACC TCATTTATCG CGCTGCAACC AATGGAAGAC GTGCGTCGCA GAACGTGCAC GTGCAACGCT CCTTCACCAT CATGAAACCT GTGGCAGAGG TGTACGCGTA CTGGCGCAAT TTCCAGAACC TGCCAAACAT CATGACGCAC CTCGAGAACG TGGAGGTCCG AGATGACCGG CGTTCGCATT GGACAGCGCT AGGACCGATG GGACTGAAGT TCGAGTGGGA CGCAGAGATC ATTGATGAAC GCGAGAATGA ATTCATCGTG TGGCGATCCG TGGAAGGTGC AGATATTGAG AACCGCGGAT CGGTGCAATT CTTTTCCGTC CTGAACGGGG AGGGCACGGA GATTTCGGCT GCGATTGACT ATGCGCCGCC AGCCGGAATT CTCGGCGCGA AGTTTGCCCA GCTATTCGGA CGCAATCCGG AGCAACAGGT GCGCGAGGAC CTGAGGGCCT TCAAGGCGCT GATGGAAGCC GGGGAAATTC CAACCATCGA AGGCCAGCCG CATGGGAAGC GCTCCGCGTT CGTGAAAGCT GCGCGGGTAG CGTACCCGGG ACATAAGCGC TCCGCGACGA ACGTGAAAGC GATCCGACAG CCCGCAGAAC AGCTGGCATA G
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Protein sequence | MDNRNSRTQA DGFNSRLRRI EPWASIVGGG ALTAFGISRK SLAGATMAAA GGYLIYRAAT NGRRASQNVH VQRSFTIMKP VAEVYAYWRN FQNLPNIMTH LENVEVRDDR RSHWTALGPM GLKFEWDAEI IDERENEFIV WRSVEGADIE NRGSVQFFSV LNGEGTEISA AIDYAPPAGI LGAKFAQLFG RNPEQQVRED LRAFKALMEA GEIPTIEGQP HGKRSAFVKA ARVAYPGHKR SATNVKAIRQ PAEQLA
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