Gene Acid345_3008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3008 
Symbol 
ID4071563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3566923 
End bp3567948 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content59% 
IMG OID637985027 
Productvon Willebrand factor, type A 
Protein accessionYP_592083 
Protein GI94970035 
COG category 
COG ID 
TIGRFAM ID[TIGR03436] VWFA-related Acidobacterial domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.780877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000171728 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGTCCAT TAAAAATGCG TTCCAGGGTC ATCGCAGTGT CGCTGGCGTT CGTGTGCGTT 
GTTGCCACCG GGGCGCAGGA GCCGGTGTTT CGCGCGCAAT CGAACGTGGT GATTGTGCCG
ACGCTGGTGC GCGATGCTGA GCGCAATGCT GTCTATGGAC TGGCGGAGAA AGACTTCATC
ATTGAAGACG ATGGGGTGCC GCAGACGGTG CACCTGGATG AAGCGTCAGA AGAGCAGCCG
GTCTCGATTG TCGTAGTTCT GCAGCTTGGA CGCCGCGCCG ATTACGAGTT GCCGCGCGTC
AAAGGATTGC GTTCCATGCT GTCGCCGCTG ATGGATGCGG GACACGCCCG GGTCGCGATG
GTGACTTTCG ATCAGGATGC AACGCTTTTC CAGGACTTCA CGAGTGATTC CAACGTTTTC
GAAAAACGGC TCGGCCAGTT GGAACCGGGA AACGGCGGAG CCGCGATTGT GGATGCGGTG
CACTTCGGCG TGAAGTTGCT GAATGCGACG CCTAAAAATA GCCAGCGCGT GCTTCTGCTG
ATCGGCGAGA CGCGCGACCA CGGCAGCACG AAGAAGCCTG AGGACCTGCT ACGCGAATTG
GGAACGAGCA ACATCGTGAT CTACGCGCTC ACGTTCTCGC CGTCGAAGTC GAATGTGCTC
GACACGCTGC GGGGGACAAA CAATCCCGAC CTGCATCCGG AGCAGAGCGA AGTGCACGAG
GGTCCGGACC TGCTGGCGCC GCTGATACTG GCGGCCGAAG GCATGCGCAA GAACGCAGCG
AAGACGATTA CGGCAATGAC CGGAGGAGAG TACACGCAGT TCGCGACGAG CAAGAACTTC
GACCGCGATA TGAACGCGTT CTCGAACCAC CTGTACTCGC GTTACGTGTT GAGCTTCGCG
CCAAGCAAGC CGCATCCGGG GTTGCATCAC CTGACCGTGA GACTGAGAGA CCCCGGTAAA
GCCGCTGTGT TAGCGAGGGA GAGTTACTGG GCGGAAGGCG CGACCAGCGG AAATCCCCAA
CCTTAG
 
Protein sequence
MSPLKMRSRV IAVSLAFVCV VATGAQEPVF RAQSNVVIVP TLVRDAERNA VYGLAEKDFI 
IEDDGVPQTV HLDEASEEQP VSIVVVLQLG RRADYELPRV KGLRSMLSPL MDAGHARVAM
VTFDQDATLF QDFTSDSNVF EKRLGQLEPG NGGAAIVDAV HFGVKLLNAT PKNSQRVLLL
IGETRDHGST KKPEDLLREL GTSNIVIYAL TFSPSKSNVL DTLRGTNNPD LHPEQSEVHE
GPDLLAPLIL AAEGMRKNAA KTITAMTGGE YTQFATSKNF DRDMNAFSNH LYSRYVLSFA
PSKPHPGLHH LTVRLRDPGK AAVLARESYW AEGATSGNPQ P