Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_3001 |
Symbol | |
ID | 4071556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 3553703 |
End bp | 3554248 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637985020 |
Product | transmembrane prediction |
Protein accession | YP_592076 |
Protein GI | 94970028 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000988417 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAACACG CGCCCGCTAC TCCCATCTAC GGCCTCATGG CTGAGTTCGA CGACATCGGC TCGCTGCTCA ACGCCGCGAA AAAAGCCTAC GCCGCCGGCT ATCGCCAAAT GGACGCCTAC TCTCCGTTCC CGAACGAAGA GCTTTCTGAC GCTATCGGTT TCCCTAAGAC CCGCGTTCCG CTCATCGTGC TGATCGGCGG AATCATGGGT GGGCTCTCGG CCTTCGCGCT GCAATATTGG TGCTCGGCCA TCAGCTACCC TGTCGTCGTC GCTGGCCGTC CGTATAATTC ATGGCCCGCG TTCGTCATCC CGTGCTTCGA ACTCACGATT CTCTTCGCGT CGCTTTCTGG TGTCTTCGGC ATGCTCGCCT TGAACGGTCT GCCTATGCCG TATCACCCGG TCTTCAACGT GGACCGCTTC GCCGCCGCAA GCCGCGACAA GTTCTTCCTC TGCCTCGAGG CCGCGGATCC CATGTTCGAC CGCATTCGGT CCGAACAGTT CCTCGCCGAC CTCAAGCCGG AATTCATCAC GGAGGTGCCC CATTAA
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Protein sequence | MEHAPATPIY GLMAEFDDIG SLLNAAKKAY AAGYRQMDAY SPFPNEELSD AIGFPKTRVP LIVLIGGIMG GLSAFALQYW CSAISYPVVV AGRPYNSWPA FVIPCFELTI LFASLSGVFG MLALNGLPMP YHPVFNVDRF AAASRDKFFL CLEAADPMFD RIRSEQFLAD LKPEFITEVP H
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