Gene Acid345_3001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3001 
Symbol 
ID4071556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3553703 
End bp3554248 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content60% 
IMG OID637985020 
Producttransmembrane prediction 
Protein accessionYP_592076 
Protein GI94970028 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000988417 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAACACG CGCCCGCTAC TCCCATCTAC GGCCTCATGG CTGAGTTCGA CGACATCGGC 
TCGCTGCTCA ACGCCGCGAA AAAAGCCTAC GCCGCCGGCT ATCGCCAAAT GGACGCCTAC
TCTCCGTTCC CGAACGAAGA GCTTTCTGAC GCTATCGGTT TCCCTAAGAC CCGCGTTCCG
CTCATCGTGC TGATCGGCGG AATCATGGGT GGGCTCTCGG CCTTCGCGCT GCAATATTGG
TGCTCGGCCA TCAGCTACCC TGTCGTCGTC GCTGGCCGTC CGTATAATTC ATGGCCCGCG
TTCGTCATCC CGTGCTTCGA ACTCACGATT CTCTTCGCGT CGCTTTCTGG TGTCTTCGGC
ATGCTCGCCT TGAACGGTCT GCCTATGCCG TATCACCCGG TCTTCAACGT GGACCGCTTC
GCCGCCGCAA GCCGCGACAA GTTCTTCCTC TGCCTCGAGG CCGCGGATCC CATGTTCGAC
CGCATTCGGT CCGAACAGTT CCTCGCCGAC CTCAAGCCGG AATTCATCAC GGAGGTGCCC
CATTAA
 
Protein sequence
MEHAPATPIY GLMAEFDDIG SLLNAAKKAY AAGYRQMDAY SPFPNEELSD AIGFPKTRVP 
LIVLIGGIMG GLSAFALQYW CSAISYPVVV AGRPYNSWPA FVIPCFELTI LFASLSGVFG
MLALNGLPMP YHPVFNVDRF AAASRDKFFL CLEAADPMFD RIRSEQFLAD LKPEFITEVP
H