Gene Acid345_2980 details

Gene Information

• Locus tag: Acid345_2980
• ID: 4068881
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Koribacter versatilis Ellin345
• Kingdom: Bacteria
• Replicon accession: NC_008009
• Strand: +
• Start bp: 3528379
• End bp: 3531759
• Gene Length: 3381 bp
• Protein Length: 1126 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637984999
• Product: integrin-like protein
• Protein accession: YP_592055
• Protein GI: 94970007

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.16679
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 12
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGCCAAG TGGCTGCGGT TAGTTTCTTT TTAGTTTTCA CTGCGGTATT CAGCGCATAC 
TCTCAGGATC TCACTCAGGC AAAGCGCACG CCTGCGGCGT CTGGCTCGAC GCAACCCAAC 
GTATTTCTCA CACCCAAACA ATATCCCGCT GGTCCTTCCG GTGTCACTTC GATCGCTAAG 
GGCGACTTCA ATAACGATAG TTACATGGAT GTCGCGGTAA CTAACGTTTC TGGCACGATC 
ACGGTTCTCC TGGGCAAAGG CGATGGCACT TTCCAAGCCC CCGTATCGTA CCCAGCCTTA 
TCTTCCCCGG TCTCGATCGC CGCGGCAGAT TTGAATGGGG ACGGAAAATT AGACTTAGCG 
GTAGCAAACA GCGGTAGTGG GAGCATTAGC GTATTCCTCG GAAATGGCGA CGGAACCTTC 
CAATCGCACA CGGATGTTGC CGTCGGCACG AGCGTGCAAA TGTTGACCGT TGCAGACTTC 
AACGGCGACG GCAAACCCGA CCTTGCGGTT TTAGTCGATG GCATGGTGAG CGTCCTGATC 
GGGAAAGGCG ACGCCACCTT CAACGCGATA GGCGAGTACG CGAAACCATG CGCTACCTAT 
TTGGCCACAG GGGATTTCAA CGGAGACGGC AAGACCGACA TCGTGGCAGG ACGTCAGTGC 
GTCCTACTGG GCAATGGCGA CGGCACTTTT CAACCGCCTG TAGGTTCCCA GAAGATTGGG 
AACACGGTGA GTACTGCAGT AGGCGACATC AATGGTGACG GCAAGCTCGA CTTGATAGAG 
GGTGGTATCG GCGACTCGGA TGGAACTCCA AGGGCCCTGG TTGTCGTGCT CCTGGGCAAT 
GGAGACGGAA CGTTTCAACC GCCCCAAGGC TTTTTTGGTT ATGGGAGCGG TGTACAGGGA 
TTATTGCTTG CCGATGTGAA CGGCGATTCC CATCCAGACA TCGTGCTGTC CAGCTCTGAA 
AACGTGGAAG TTGTAAACGG AAAGGGGGAC GGCACCTTTG AACCGGGTGT GCTCTACCCC 
GTGGGGAACC GGCCGGTAGC AGGAGGGTTG GTGCTGTCCG ATTTTACCGG CAGCGGCAGG 
CTTGATCTCG CAGTTTTGAC CTCGTGCGCT AACCCGTCTA TTTGTGGAGA CGGAGCCGTG 
ACCCTATTGA GAGGCAAAGG GGACGGCACG TATGTTGCGC CAGCAAGTTA TTACATTTTT 
GAGGGTGACG AACGTTTCGA CGCTGTAGGG GGATGGGTCG CGGTGGGTGA CTTCGACGGC 
GACGGGAAAC TCGACGTACT CGAAGTATTC GACACTCGCG CCTTCATCTC TCTAGGAAAC 
GGGGATGGCA CCGTGCAAAC GGGCCAACGT TATTATCAAG TTGCATATCA GTCCGATGGG 
GCGGTAGTGG GAGATTTCAA CGGCGATGGC AAACTCGACG CTGCCATTCT ACACTCTTGC 
GACGTCTTTT ATAGCGACCC TGGCCCAGGC AATCCTCCCC CCTATTGCGT TAGCGCAGGT 
TCGGTAGGGG TGCTATTGGG AAATGGAAAC GGAACTTGGC AGCGGTGGCC GGAGAGCCTG 
TACTTTGGAG TTGGAGACAC GCCTACATCT ATTGCGACGG GTGACTTCAA TCAAGATGGC 
AAACTCGACC TTGTCGTTTC TGATGGAGCG AATGCTTATA TTCTCTTAGG AAACGGTGAT 
GGCACTTTCC CGGTCCACCA AGCCTACCCA ACCGGAGCTG CGGCTGATTA CCTTAATCCG 
TTTCTGCCCA ATGCGCAATC GGTCGTAGTT GGCGATTTCA ATGGCGACGG CGCTCCGGAC 
GTCGCGGTTT CAAATTCAGA CGGGGGTATC GCCGTTTTGC TCGGCAACGG GGACGGCACG 
CTCCGCGCCC CCCAACTCTT CCCAGCTATA AAGAGTTCGC AGTCGCTTGC GATCGGAGAT 
CTTAACCGAG ATGGCAAATT GGACATCGTA GCTTCCGACG GGAGTGGCAG CATCAGTATT 
TTCCTTGGTA ATGGCGATGG TACTTTCCAG ACCAGCAAAG TTTATGCGGC CGTTGGATCA 
CAAAGTGTAA CGGTCGGAGA TTTTAACGGC GACGGCATCC TTGACGTAGC GAGTGGGACG 
GGACACACCG TAAGCCTGCT TCTCGGAAAT GGCGATGGCA GTTTGCAGCC GCCGGTGAAT 
TACATTGTTG GACTCAGTGC AACCGGGCTG GCAGCTGGAG ACTTCAATGG GGACGGGGCT 
TTGGACCTCG TCACCGAAGA CTTCTCGATT CTATTGAATC GCCAGGGAAC GCAGCTTAAC 
GTGCAATCTT CCCGCAATCC ATCCAACGTA GGCCAACCTG TGACTTTCAC CGTGACCTCC 
GCTGCGAGTT TGCCGGAGAC AGGCTTGCCT TCGGGCACCA TCACGCTGCG CGATGGGAGC 
ACTGTGCTGG GAGAATCCGG GGTATCGGGA GTATTTGACG TGAAGGTCTC CGGATTGACT 
GCCGGAACGC ACCAAATCAC GGCCACATAC TCCGGCGATA ACAACTTTCA ACCACACACG 
ACCGCCATCC TGACAGAACA CGTCGGTGCT CCCGCCACGA TGATTAGCCC CGCTCTTGGA 
TCGATTCTAA CCAGCACTAC CGTAACCTTC GCGTGGAAAG CAGCCGCGGG TGCTTCGCAG 
TACAGCCTGT ACCTCGGCAC TAAACCCGGT CGGGACGACC TCGGGTACGT CAATGCGCAT 
TCGAGCACGT CCGCGACTGT GAAAAACCTC CCATCCACGG GATCCTCCCT ATACGTCACG 
CTCTTCTCGC TTGTCGGAGG GGTGTACTAT TCAAATTCTT ATACGTATAT CCTCCCTGGA 
ACACCTGCCA AGGCCAAGAT GACCTCGCCC CTGCCCGGCA CGATGTTAGT CGGCAAGGAT 
GCGACATTTA CGTGGAGCCA CGGAACGGGC GTCACCTACT ACAGTCTGTA TGTCGGGACA 
AAGGGTTACG GCACTCACGA TCTGGATTTC ATCAACGCCA CGACTACCAG TGCCAGCGTG 
TCGAACCTCC CTGCCGACGG GAGCACAATC TACGTTCAAG TAAATTCGTA TATCGACGGC 
GCGTGGACTA GCCAGAGCTA CACCTATATA AGTGGAAGTG GAACTCCCGC GCCCGCAACC 
ATGATCTCGC CCACCCCTGG AAGCAGTATC TCCGGCAACT CTGCGACTTT CACATGGACG 
AGCGGCGTTG GAGTCAGCGA ATTCAGTTTG TACGTAGGTA CGGGAGGGGT GGGTTCCCAT 
AACATTGCGT TCATCGAAAC CGGAACCACG AGTGCGACCG TCACTGGCCT TCCCGCTACC 
GGCGCAACGA TCTATGTGCG CTTGAATTCG TTTGTCAACG GCGCGTGGCA GTGGGTGGAC 
TATTCTTATC GGAACCCGTA A 

 

Protein sequence

MRQVAAVSFF LVFTAVFSAY SQDLTQAKRT PAASGSTQPN VFLTPKQYPA GPSGVTSIAK 
GDFNNDSYMD VAVTNVSGTI TVLLGKGDGT FQAPVSYPAL SSPVSIAAAD LNGDGKLDLA 
VANSGSGSIS VFLGNGDGTF QSHTDVAVGT SVQMLTVADF NGDGKPDLAV LVDGMVSVLI 
GKGDATFNAI GEYAKPCATY LATGDFNGDG KTDIVAGRQC VLLGNGDGTF QPPVGSQKIG 
NTVSTAVGDI NGDGKLDLIE GGIGDSDGTP RALVVVLLGN GDGTFQPPQG FFGYGSGVQG 
LLLADVNGDS HPDIVLSSSE NVEVVNGKGD GTFEPGVLYP VGNRPVAGGL VLSDFTGSGR 
LDLAVLTSCA NPSICGDGAV TLLRGKGDGT YVAPASYYIF EGDERFDAVG GWVAVGDFDG 
DGKLDVLEVF DTRAFISLGN GDGTVQTGQR YYQVAYQSDG AVVGDFNGDG KLDAAILHSC 
DVFYSDPGPG NPPPYCVSAG SVGVLLGNGN GTWQRWPESL YFGVGDTPTS IATGDFNQDG 
KLDLVVSDGA NAYILLGNGD GTFPVHQAYP TGAAADYLNP FLPNAQSVVV GDFNGDGAPD 
VAVSNSDGGI AVLLGNGDGT LRAPQLFPAI KSSQSLAIGD LNRDGKLDIV ASDGSGSISI 
FLGNGDGTFQ TSKVYAAVGS QSVTVGDFNG DGILDVASGT GHTVSLLLGN GDGSLQPPVN 
YIVGLSATGL AAGDFNGDGA LDLVTEDFSI LLNRQGTQLN VQSSRNPSNV GQPVTFTVTS 
AASLPETGLP SGTITLRDGS TVLGESGVSG VFDVKVSGLT AGTHQITATY SGDNNFQPHT 
TAILTEHVGA PATMISPALG SILTSTTVTF AWKAAAGASQ YSLYLGTKPG RDDLGYVNAH 
SSTSATVKNL PSTGSSLYVT LFSLVGGVYY SNSYTYILPG TPAKAKMTSP LPGTMLVGKD 
ATFTWSHGTG VTYYSLYVGT KGYGTHDLDF INATTTSASV SNLPADGSTI YVQVNSYIDG 
AWTSQSYTYI SGSGTPAPAT MISPTPGSSI SGNSATFTWT SGVGVSEFSL YVGTGGVGSH 
NIAFIETGTT SATVTGLPAT GATIYVRLNS FVNGAWQWVD YSYRNP