Gene Acid345_2960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_2960 
Symbol 
ID4068861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3504055 
End bp3504597 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content58% 
IMG OID637984979 
ProductMarR family transcriptional regulator 
Protein accessionYP_592035 
Protein GI94969987 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.778085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.726943 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATAATT GCTTGCATCA TGCAAGTAAT TATGATGGAA TGCGAGTTAT GACGAAAGAC 
CCCGCTGTAC AGACCTGGTG GGACGAGTTG GAGAGGTTGG CCCGGATTCT CGGACAAGTC
GGGCCCGACG AAGTCTGTTG TGAAGGTTTG AGCCAGCGGC AGTGCGCAAT CCTGCGCGTA
CTGGTTGCGA GAGAGGGCAC TCGGATCTCG GACCTGGCGG CGGTGTCTGC GATCTCACCC
AGTGCAATGA CGCGAGTGCT GGAGAAACTG GAGGCGCGTG GGCTGGTGGA GCGCGTCCGA
GGCGCACACG ACGATGGACG CGCTGCCATG GTGCGTATCA CTCCGGAAGG CCGGCGTACG
CGGAAGCAAC TTGACGGTTT GATGATCGAC CGGACCAACC AGATCATCGC TTCCATTCCT
GAGAAACAGC GGCCGCAAAT CCTCAAGGCA CTGACCATCC TGAACAATGC AATCGAGTCC
GCGGGATGCT GCGCACTGAA TGCACCCGTG GAGCGGCTCA CGCAGATCGA GGAGAAGAAA
TGA
 
Protein sequence
MNNCLHHASN YDGMRVMTKD PAVQTWWDEL ERLARILGQV GPDEVCCEGL SQRQCAILRV 
LVAREGTRIS DLAAVSAISP SAMTRVLEKL EARGLVERVR GAHDDGRAAM VRITPEGRRT
RKQLDGLMID RTNQIIASIP EKQRPQILKA LTILNNAIES AGCCALNAPV ERLTQIEEKK