Gene Acid345_2908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_2908 
Symbol 
ID4071209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3453572 
End bp3454372 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content55% 
IMG OID637984926 
Productputative secreted glycosyl hydrolase 
Protein accessionYP_591983 
Protein GI94969935 
COG category[S] Function unknown 
COG ID[COG3828] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGAAGCA ATTTGAACGA ACGGCCATCG GCGATAACAC TCCGTGCGGT TTACTCCGCC 
CTCTTTCTGC TGATTGCAAT CACGACGGCG GGTCTTGGGC AGGCCTCGGC GCCCAAGTTC
CGCGTGATCG CTCTCGCGGA GCACGGAGGG ATTCATCAGC CGTTTGTGGA CGCGGCGAAG
CAATGGCTCG GTGACCTTTC GAAGCAAGAG AACTTCTCGG TGGATTACAT CGAGGACACG
GAGAAGATCG ACGACGACTT TCTCTCGCAT TACCAGCTTT TTATTCAACT CAACTACCCG
CCCTATATGT GGACGCCGAA GGCGATGGCA GCCTTCCAGA AATACATTGA GCAGGGAAGA
GGCGGCTGGA TTGGATTTCA CCACGCCACG TTGCTTGGTG AATTTGACGG CTACGCCATG
TGGCCGTGGT TCCACGAGTT CATGGGCGGT ATTCGTTGGA AGGATTACAT CGCAAAGTTC
GCGACCGCCA AGGTCGTGGT GGAAGACGCG AAACATCCGG TGCTGCAAGG AGTGCCGGCG
AGCTTCATGA TCGAGAACGA AGAGTGGTAC ACCTATGATC GGTCGCCGCG ACCCAATGTG
CACGTGCTGG CGCATGTGGA TGAGTCCACG TACAAGCCTG ACACGAAGAC GAAGATGGGA
GACCATCCGG TGATCTGGAG CAACGAGCGC ATGAAGGCGC GGAACATTTA CATCTTTATG
GGACACCATC CGGAGCTGTT CCAGAACGAA GCTTTCACAA CGATCTTCAA GAACTCCATT
CTGTGGGCTG CCCATCCATG A
 
Protein sequence
MRSNLNERPS AITLRAVYSA LFLLIAITTA GLGQASAPKF RVIALAEHGG IHQPFVDAAK 
QWLGDLSKQE NFSVDYIEDT EKIDDDFLSH YQLFIQLNYP PYMWTPKAMA AFQKYIEQGR
GGWIGFHHAT LLGEFDGYAM WPWFHEFMGG IRWKDYIAKF ATAKVVVEDA KHPVLQGVPA
SFMIENEEWY TYDRSPRPNV HVLAHVDEST YKPDTKTKMG DHPVIWSNER MKARNIYIFM
GHHPELFQNE AFTTIFKNSI LWAAHP