| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2904 |
|---|
| Symbol | |
|---|
| ID | 4071205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 3447333 |
|---|
| End bp | 3448973 |
|---|
| Gene Length | 1641 bp |
|---|
| Protein Length | 546 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637984922 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_591979 |
|---|
| Protein GI | 94969931 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGTCCCC TGAGCACCGA AATCCTGGCA GCTTTCTCTG TCTCACAGGC ACACGGAGCG
CAACATTGGA TCCGCACGCA CGTCCTCGAC ACCACGTTTA AAGGCCTTTA CCAAGCCAAC
GCCTTCGACC TCTGCCTTCT CATTCCGTAC TTCATCGTCC TCATTATTCT TGCCGCGTAT
GGCGTGCATC GGTACCAGCT CGTCTGGATG TACTACCGCA ATCGCAAGAA TAAGACGACT
GACCCGCCGC AGCACTTCGC CGAGTTGCCG CGCGTCACCG TGCAGTTGCC GATCTTCAAC
GAACAGTACG TCATTGACCG CCTCGTAGAA GCCGTTTGCA AGCTCGACTA CCCGAAGGAC
AAGCTCGACA TCCAGGTCCT CGACGACTCC ACCGACGAGA CCGTCGAAGT TGCGCGCGAG
GTGGTGGAGC GCTATGCCGC GCTTGGCAAC CCGATCTCTT ATATTCATCG GACGAACCGC
CACGGCTTCA AGGCGGGCGC ACTTCAGGAA GGTATGGCCG TCTGCAAGGG CGAGTTCATC
GCCATCTTCG ACGCCGACTT CGTGCCGCCC GCAGACTTTC TACAGAAGTG CATTCACCAC
TTCGCCGAGC CGGAAATCGG TATGGTGCAA ACGCGCTGGA CGCACCTGAA CCGCAACTAC
TCGTTCCTCA CCGAAGTTGA GGCCATCCTC CTTGACGGCC ACTTCGTGCT TGAGCACGGC
GGCCGCTCCC GCAAGGGCGT CTTTTTCAAC TTCAACGGCA CCGCCGGCAT GTGGCGCAAG
CAGGCCATTG AAGAAGCTGG TGGCTGGCAG CACGACACCC TGACCGAAGA CACCGATCTC
AGCTATCGCG CGCAGGTAAA GGGTTGGCGG TTCAAGTATC TGCAGGATGT CGAGTGCCCC
GCGGAATTGC CGATCGAAAT GACGGCCTTC AAAACCCAGC AGGCGCGTTG GGCGAAGGGG
CTTATCCAGT GCTCGAAAAA AGTGTTGCCG TTCTTGTACC GCAGCGACGT GCCGCGGCGC
GTAAAAGTCG AAGCCTGGTA TCACCTCACC GCCAACATTA GTTATCCGCT GATGATCGTT
CTATCGGCCC TCATGCTTCC GGCGATGGTG CTGCGCTTCT ACCAGGGCTG GTTTCAAATG
CTCTACATTG ATATGCCGCT GTTCCTGGCA TCCACGTTCA GCATCTCGAG CTTCTATCTA
GTCTCGCAAA AAGAACTCTA TCCAAAGACG TGGCTGCGGA CATTCATGTA TCTGCCCGCA
CTCATGGCGC TCGGGATCGG CCTGACGGTG ACGAATACAA AGGCCGTGCT GGAAGCCATC
GTCGGCAAGC AGTCGGCCTT CGCACGTACG CCTAAATATC GCGTCACCAA CAAGGGCGAG
AAATCCATCG CCGCAAAGAA GTATCGCAAG CGCCTCGGCA TCATTCCCTG GATCGAACTG
GCGATCGGCA CGTGGTTCGC CGCGTGCGTG TGGTACGCCG TCAGCCGCGA GAACTACATT
ACAGTTCCCT TCCTCTGCTT GTTTGTCTTC GGTTACTGGT ACACAGGACT GATGTCACTC
CTGCAAGGCC GCTTCGATTC GCTCATGGGC CGCACCGCCA GCCCGGAAAC CCACACCAAG
CCCTTCCCCG TCGGCGTGTA G
|
|---|
| Protein sequence | MRPLSTEILA AFSVSQAHGA QHWIRTHVLD TTFKGLYQAN AFDLCLLIPY FIVLIILAAY
GVHRYQLVWM YYRNRKNKTT DPPQHFAELP RVTVQLPIFN EQYVIDRLVE AVCKLDYPKD
KLDIQVLDDS TDETVEVARE VVERYAALGN PISYIHRTNR HGFKAGALQE GMAVCKGEFI
AIFDADFVPP ADFLQKCIHH FAEPEIGMVQ TRWTHLNRNY SFLTEVEAIL LDGHFVLEHG
GRSRKGVFFN FNGTAGMWRK QAIEEAGGWQ HDTLTEDTDL SYRAQVKGWR FKYLQDVECP
AELPIEMTAF KTQQARWAKG LIQCSKKVLP FLYRSDVPRR VKVEAWYHLT ANISYPLMIV
LSALMLPAMV LRFYQGWFQM LYIDMPLFLA STFSISSFYL VSQKELYPKT WLRTFMYLPA
LMALGIGLTV TNTKAVLEAI VGKQSAFART PKYRVTNKGE KSIAAKKYRK RLGIIPWIEL
AIGTWFAACV WYAVSRENYI TVPFLCLFVF GYWYTGLMSL LQGRFDSLMG RTASPETHTK
PFPVGV
|
|---|
| |