Gene Acid345_2896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_2896 
Symbol 
ID4071197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3440003 
End bp3442543 
Gene Length2541 bp 
Protein Length846 aa 
Translation table11 
GC content61% 
IMG OID637984914 
ProductABC efflux pump, inner membrane subunit 
Protein accessionYP_591971 
Protein GI94969923 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID[TIGR03434] Acidobacterial duplicated orphan permease 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTGGA TTGGGCGGCT GGTGCGTCGC GGACGGATGG AAAGGGAACT CGATGCTGAA 
CTGCGCTTCC ACTTCGAGAC CCTCGTCGCG GAGAGAATGC AGCGCGGCAT GACGGAGACC
GAGGCCCGCC GCAGCGCACG TCTGGACTTT GGCGGCATGG ACCAGGTGAA GGAAGATTGT
CGCGAGAGCC GCGGCACGCT GTGGGTGGAA TCGATTGCGC AAGACCTTCG CTTTGGGGCG
CGCATCCTGG CGCGCTCGCC GGGATTTTCC GCTACCGCGA TTCTCGTGCT CGCGCTCGGC
ATCGGGGTGA GCACGCTGGC GTTCAGTCTG TACAACCTGA TCGCACTGCA GTCGCTGCCG
GTCCGCGATC CGCAATCGCT GGTGGGCATG CAACGACGTT CGCCGGAGAA CATTGCTCCC
AACCTGCCGT ATGCGTCGAT CACTTACTAT GGCGACAACG CGAAGTCGCT CTCGGCCGTG
ATGGCAACCA TGACGGCGAT GCCGATGCTG ATGGATCGCG ACGAGCAGCG CATCACTCCT
GGCTTTGTGA CCGCCAACTA CTTCAGCGAA CTGGGCGCTG CCGCTGCTGC GGGACGCCTG
TTCATGCCCG ATCGTGAAAG TTCCTCCGAC TCTCCACCTG CGGTCGTGCT CAGCTATCGG
TTCTGGCAGA GAAGATTCAA TGGCGACCCT GCCGTCGTGG GCAGAGTTGT GCATCTCTCG
GGAAAGGCGG CGACGGTGGT CGGCGTGGCC AGCAAATCGT TCGCGAACCT CGGTGTCGAC
GATCCCGACT TGTGGCTGCC GCTGGCGCAG TATTCGTACT TCGTGGAAGG CAGCCGGCCG
CTTGACGATC CCAAGTTCGA TGGCCTGATC ATGATGTGGG GACGTCTCGC GCCAGGGTTC
ACGGCGTCCA CCGCGCAGCA GGAGTTACTC GCGCTCACGG ACCAACTGCG GAAGCTTTAT
CCGGCGATGA TCTGGGACAA CGAACGCATT GTGGTGACGC CCGGCGCGCA CTTCTTCACC
TCGGAAGATA GCGGCCCGAT ACTGGCGTTC GTCGCGGTAC TGGTGTTGCT GATTCTAGGC
ATTGCCTGCG CCAATCTTGG CGGACTGCTC ATGGCGCGCG GCGCCAGTCG ACAACGCGAA
ATTCGTCTGC GCTTTGAGCT TGGTGCACGG CGATTCCGCG TCTTCCGGCA ACTGCTTACT
GAGAACTTTC TGCTCGGGTT CCTTGGCGCG GTGGCCGCGC TGCCGCTCAG TTACGTCGCG
CTGCGACTCA CCCTCACGTA CGCTAACGCT CCTTCGTGGA TGAGTGCCGT GCCCGACTGG
CGTGTGCTCG TGTTCACCGC CGCCATGGGC TTTCTTGCCG CGATGTTTTT CGGATTCCTG
CCGACCGTGC AGATGGTCCG CCACAAAACC AACCGGACGC TGTGGCACCA GTTCGTGGTG
TGTGCACAGG TCGGCGCTAG TTGTGTGCTG CTTATTCTTG CGGGATTGCT GGTCCGCGCG
ACTCTGCACA CGCTGTACAC AAATCCGGGC TTTGGATACG AGCAGGTGTA CTCCATCGAT
CCTGGATTGC ATGATCACGG CTACAACGCG GCGACCGCGC AGACCTATCT CGACCAGATG
CAGGAGCGTT TGCGCGCCGT GCCGGGCGTG GCTTCGGTGT CTGTGGCGCT CAATCCGCCG
CTCGTCAGTA AAGAGGTGAT GATCACCAGC ATCGACGTCA ACGGCAAGCG CGTGTTGATC
TATCCCAACT GGGTCGGGCC TGAATTCTTC CAGACGATGC AGATCCCATT GCTCCGCGGG
CGGCTCATTC AGCCTGGGGA AAACAACGCG GTCATGTTGA GTGAGTCGCT CGCGCGCCAG
CGCTGGCCCA ACGAAGATCC TATCGGCAAG CCCTGGAAGA ACACGAAGAA CGTAGTCGTC
GGCGTGGTTG GGAATACGCG CGCGATGGAA CTCAACAACA CCGACGCGAC CGAACTCTAC
TACCCACCAG CGGCGGAGCA CTTGGCTTCG ATGTCGGTGC TGGTGCGCGT TGCAGGCGAT
CCGGCAAATG TTTTGCCTGC GATTAAGTCG GTGGCTGCGG AAGGTGACAC GAAACTCTTT
CCGACGATCA CGCCGCTGAG CGCGGGATTT CGCAAGAATG TTGCGGTCGT GGAACAGGTC
GCTACGATTA TTAGTTTGCT GGGGGGCATT GCGATTTTTC TTGCGGTGGT TGGACTGCTC
GGACTTGTCA GTTACGCGGT GTCGCAACGC ACCCGGGAGA TCGCGATTCG GCTCGCGCTG
GGGGCGCATC GCGCTGAGAT ATTTTCTGCC GTGTTGCGGC GGTTTGCATG GCCGGTTGCG
ATTGGGCTTA TCGCTGGAGT GGGCGTCACG GCCGGGCTTT CGCAAGTTTT GCGGCGCGGG
CTGTATGGCA TCAGCGGGCT TGATCCGATT AGCTATGCTG GGGCGATCGC GTGTTTGTTG
GCGATTTTGA TGGGTGCTGC TCTGCTGCCG TTACGGCGCG CGCTGCGGAT TGATATTGCT
CGGATTCTGC ACGCTGAGTA A
 
Protein sequence
MNWIGRLVRR GRMERELDAE LRFHFETLVA ERMQRGMTET EARRSARLDF GGMDQVKEDC 
RESRGTLWVE SIAQDLRFGA RILARSPGFS ATAILVLALG IGVSTLAFSL YNLIALQSLP
VRDPQSLVGM QRRSPENIAP NLPYASITYY GDNAKSLSAV MATMTAMPML MDRDEQRITP
GFVTANYFSE LGAAAAAGRL FMPDRESSSD SPPAVVLSYR FWQRRFNGDP AVVGRVVHLS
GKAATVVGVA SKSFANLGVD DPDLWLPLAQ YSYFVEGSRP LDDPKFDGLI MMWGRLAPGF
TASTAQQELL ALTDQLRKLY PAMIWDNERI VVTPGAHFFT SEDSGPILAF VAVLVLLILG
IACANLGGLL MARGASRQRE IRLRFELGAR RFRVFRQLLT ENFLLGFLGA VAALPLSYVA
LRLTLTYANA PSWMSAVPDW RVLVFTAAMG FLAAMFFGFL PTVQMVRHKT NRTLWHQFVV
CAQVGASCVL LILAGLLVRA TLHTLYTNPG FGYEQVYSID PGLHDHGYNA ATAQTYLDQM
QERLRAVPGV ASVSVALNPP LVSKEVMITS IDVNGKRVLI YPNWVGPEFF QTMQIPLLRG
RLIQPGENNA VMLSESLARQ RWPNEDPIGK PWKNTKNVVV GVVGNTRAME LNNTDATELY
YPPAAEHLAS MSVLVRVAGD PANVLPAIKS VAAEGDTKLF PTITPLSAGF RKNVAVVEQV
ATIISLLGGI AIFLAVVGLL GLVSYAVSQR TREIAIRLAL GAHRAEIFSA VLRRFAWPVA
IGLIAGVGVT AGLSQVLRRG LYGISGLDPI SYAGAIACLL AILMGAALLP LRRALRIDIA
RILHAE