Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2896 |
Symbol | |
ID | 4071197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 3440003 |
End bp | 3442543 |
Gene Length | 2541 bp |
Protein Length | 846 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637984914 |
Product | ABC efflux pump, inner membrane subunit |
Protein accession | YP_591971 |
Protein GI | 94969923 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTGGA TTGGGCGGCT GGTGCGTCGC GGACGGATGG AAAGGGAACT CGATGCTGAA CTGCGCTTCC ACTTCGAGAC CCTCGTCGCG GAGAGAATGC AGCGCGGCAT GACGGAGACC GAGGCCCGCC GCAGCGCACG TCTGGACTTT GGCGGCATGG ACCAGGTGAA GGAAGATTGT CGCGAGAGCC GCGGCACGCT GTGGGTGGAA TCGATTGCGC AAGACCTTCG CTTTGGGGCG CGCATCCTGG CGCGCTCGCC GGGATTTTCC GCTACCGCGA TTCTCGTGCT CGCGCTCGGC ATCGGGGTGA GCACGCTGGC GTTCAGTCTG TACAACCTGA TCGCACTGCA GTCGCTGCCG GTCCGCGATC CGCAATCGCT GGTGGGCATG CAACGACGTT CGCCGGAGAA CATTGCTCCC AACCTGCCGT ATGCGTCGAT CACTTACTAT GGCGACAACG CGAAGTCGCT CTCGGCCGTG ATGGCAACCA TGACGGCGAT GCCGATGCTG ATGGATCGCG ACGAGCAGCG CATCACTCCT GGCTTTGTGA CCGCCAACTA CTTCAGCGAA CTGGGCGCTG CCGCTGCTGC GGGACGCCTG TTCATGCCCG ATCGTGAAAG TTCCTCCGAC TCTCCACCTG CGGTCGTGCT CAGCTATCGG TTCTGGCAGA GAAGATTCAA TGGCGACCCT GCCGTCGTGG GCAGAGTTGT GCATCTCTCG GGAAAGGCGG CGACGGTGGT CGGCGTGGCC AGCAAATCGT TCGCGAACCT CGGTGTCGAC GATCCCGACT TGTGGCTGCC GCTGGCGCAG TATTCGTACT TCGTGGAAGG CAGCCGGCCG CTTGACGATC CCAAGTTCGA TGGCCTGATC ATGATGTGGG GACGTCTCGC GCCAGGGTTC ACGGCGTCCA CCGCGCAGCA GGAGTTACTC GCGCTCACGG ACCAACTGCG GAAGCTTTAT CCGGCGATGA TCTGGGACAA CGAACGCATT GTGGTGACGC CCGGCGCGCA CTTCTTCACC TCGGAAGATA GCGGCCCGAT ACTGGCGTTC GTCGCGGTAC TGGTGTTGCT GATTCTAGGC ATTGCCTGCG CCAATCTTGG CGGACTGCTC ATGGCGCGCG GCGCCAGTCG ACAACGCGAA ATTCGTCTGC GCTTTGAGCT TGGTGCACGG CGATTCCGCG TCTTCCGGCA ACTGCTTACT GAGAACTTTC TGCTCGGGTT CCTTGGCGCG GTGGCCGCGC TGCCGCTCAG TTACGTCGCG CTGCGACTCA CCCTCACGTA CGCTAACGCT CCTTCGTGGA TGAGTGCCGT GCCCGACTGG CGTGTGCTCG TGTTCACCGC CGCCATGGGC TTTCTTGCCG CGATGTTTTT CGGATTCCTG CCGACCGTGC AGATGGTCCG CCACAAAACC AACCGGACGC TGTGGCACCA GTTCGTGGTG TGTGCACAGG TCGGCGCTAG TTGTGTGCTG CTTATTCTTG CGGGATTGCT GGTCCGCGCG ACTCTGCACA CGCTGTACAC AAATCCGGGC TTTGGATACG AGCAGGTGTA CTCCATCGAT CCTGGATTGC ATGATCACGG CTACAACGCG GCGACCGCGC AGACCTATCT CGACCAGATG CAGGAGCGTT TGCGCGCCGT GCCGGGCGTG GCTTCGGTGT CTGTGGCGCT CAATCCGCCG CTCGTCAGTA AAGAGGTGAT GATCACCAGC ATCGACGTCA ACGGCAAGCG CGTGTTGATC TATCCCAACT GGGTCGGGCC TGAATTCTTC CAGACGATGC AGATCCCATT GCTCCGCGGG CGGCTCATTC AGCCTGGGGA AAACAACGCG GTCATGTTGA GTGAGTCGCT CGCGCGCCAG CGCTGGCCCA ACGAAGATCC TATCGGCAAG CCCTGGAAGA ACACGAAGAA CGTAGTCGTC GGCGTGGTTG GGAATACGCG CGCGATGGAA CTCAACAACA CCGACGCGAC CGAACTCTAC TACCCACCAG CGGCGGAGCA CTTGGCTTCG ATGTCGGTGC TGGTGCGCGT TGCAGGCGAT CCGGCAAATG TTTTGCCTGC GATTAAGTCG GTGGCTGCGG AAGGTGACAC GAAACTCTTT CCGACGATCA CGCCGCTGAG CGCGGGATTT CGCAAGAATG TTGCGGTCGT GGAACAGGTC GCTACGATTA TTAGTTTGCT GGGGGGCATT GCGATTTTTC TTGCGGTGGT TGGACTGCTC GGACTTGTCA GTTACGCGGT GTCGCAACGC ACCCGGGAGA TCGCGATTCG GCTCGCGCTG GGGGCGCATC GCGCTGAGAT ATTTTCTGCC GTGTTGCGGC GGTTTGCATG GCCGGTTGCG ATTGGGCTTA TCGCTGGAGT GGGCGTCACG GCCGGGCTTT CGCAAGTTTT GCGGCGCGGG CTGTATGGCA TCAGCGGGCT TGATCCGATT AGCTATGCTG GGGCGATCGC GTGTTTGTTG GCGATTTTGA TGGGTGCTGC TCTGCTGCCG TTACGGCGCG CGCTGCGGAT TGATATTGCT CGGATTCTGC ACGCTGAGTA A
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Protein sequence | MNWIGRLVRR GRMERELDAE LRFHFETLVA ERMQRGMTET EARRSARLDF GGMDQVKEDC RESRGTLWVE SIAQDLRFGA RILARSPGFS ATAILVLALG IGVSTLAFSL YNLIALQSLP VRDPQSLVGM QRRSPENIAP NLPYASITYY GDNAKSLSAV MATMTAMPML MDRDEQRITP GFVTANYFSE LGAAAAAGRL FMPDRESSSD SPPAVVLSYR FWQRRFNGDP AVVGRVVHLS GKAATVVGVA SKSFANLGVD DPDLWLPLAQ YSYFVEGSRP LDDPKFDGLI MMWGRLAPGF TASTAQQELL ALTDQLRKLY PAMIWDNERI VVTPGAHFFT SEDSGPILAF VAVLVLLILG IACANLGGLL MARGASRQRE IRLRFELGAR RFRVFRQLLT ENFLLGFLGA VAALPLSYVA LRLTLTYANA PSWMSAVPDW RVLVFTAAMG FLAAMFFGFL PTVQMVRHKT NRTLWHQFVV CAQVGASCVL LILAGLLVRA TLHTLYTNPG FGYEQVYSID PGLHDHGYNA ATAQTYLDQM QERLRAVPGV ASVSVALNPP LVSKEVMITS IDVNGKRVLI YPNWVGPEFF QTMQIPLLRG RLIQPGENNA VMLSESLARQ RWPNEDPIGK PWKNTKNVVV GVVGNTRAME LNNTDATELY YPPAAEHLAS MSVLVRVAGD PANVLPAIKS VAAEGDTKLF PTITPLSAGF RKNVAVVEQV ATIISLLGGI AIFLAVVGLL GLVSYAVSQR TREIAIRLAL GAHRAEIFSA VLRRFAWPVA IGLIAGVGVT AGLSQVLRRG LYGISGLDPI SYAGAIACLL AILMGAALLP LRRALRIDIA RILHAE
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