Gene Acid345_2886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_2886 
Symbol 
ID4071187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3427501 
End bp3428328 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content59% 
IMG OID637984904 
ProductABC transporter, ATPase subunit 
Protein accessionYP_591961 
Protein GI94969913 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.21978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAT CGCCAACCAA CGGCCCGGAC CGCGACAAGC CATATTTGCA ATTCGAGAAC 
GTCAGCAAAT CGTTCGGCAC GAAGCACGTG CTGCGCGACG TGAGCTGGAG CGTGAAGTCC
GGGGAGACGA TGTGCATTCT CGGGCGCTCA GGCGTGGGCA AATCGGTGTC GCTGCACAAC
ATCATGGGCT TCCTCAAGCC GGATTCCGGG CGCATTCACG TCGCCTACGA GGACATTACC
GATTATGGCG AGAAGGATAT GGAGCGCATC CGGAAGAAAG TGACGATGGT CTTCCAGAGC
GGCGCGCTGT TTGATTCGCT CACTGTCGGC GAGAACGTGG CGTTTCCATT GCGCGAGCGC
GGCGGACTGG AAGAGGCGCA GATCTTCCAG ATCGTGGATG GCCTGCTGGA GATGGTCGGC
GTGGGACACA TGCGCGACCT GCTGCCGGCT GAGCTGTCGA CGGGCATGCG GCGGTCGGTG
GCGATCGCGC GCGCGCTTTC GGCTGAGCCG GAATGCATTC TCTACGATGA GCCGACGACG
ATGGTGGACC CGATGATGGC CCATCTGCTC GGCGATTTGA TCCAAAAGCT CAAGTATCAG
TTGAAGCTGA CCAGCGTAGT GGTGACGCAC GATATGTCGC TGGCGAAGAA GCTGGCAGAC
AAGCTGATCT TTCTCTACGA AGGCGCCGTG GTTTTTTACG GCACACCGAA AGAGATGGAG
CAGTCGAAGG TGGAGATCGT GCAGGAATTC CTGGAACTGG ATTCGACGGA TTTCAGCACC
TTCGGGACGA CGGATTTGCG GAGGCATGCG CCGGGAGACA TTGGGTAA
 
Protein sequence
MSTSPTNGPD RDKPYLQFEN VSKSFGTKHV LRDVSWSVKS GETMCILGRS GVGKSVSLHN 
IMGFLKPDSG RIHVAYEDIT DYGEKDMERI RKKVTMVFQS GALFDSLTVG ENVAFPLRER
GGLEEAQIFQ IVDGLLEMVG VGHMRDLLPA ELSTGMRRSV AIARALSAEP ECILYDEPTT
MVDPMMAHLL GDLIQKLKYQ LKLTSVVVTH DMSLAKKLAD KLIFLYEGAV VFYGTPKEME
QSKVEIVQEF LELDSTDFST FGTTDLRRHA PGDIG