| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2874 |
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| Symbol | |
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| ID | 4070393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 3418237 |
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| End bp | 3418866 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637984892 |
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| Product | 16S rRNA processing protein RimM |
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| Protein accession | YP_591949 |
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| Protein GI | 94969901 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCGA CATCCTCGAC TAATACGGAC GACTTCATCA CCATAGCCCG GATCCAAAAG
ACCCAGGGCC GGGTTGGCGA AGTCTTCTCG GAGTTGTTCA CCGACTTCCC CGAGTTGTTC
GAGCAGCGGC ATCACCTGTA CGTGTTGCCG GAAAAAGGTG AACGTCGCGA ACTGGAACTG
GAAGATCACT GGTTCCACAA GGGCGGGGTA GTTTTAAAGT TTCAGGGAAT CGAAACTATC
GACGACGCAG AAAAACTGCT TCGCAGCGAG GTTCAGATTC CCAGGCAAGA TCGGGCCCAG
TTGGAAGAAG GCGCTACCTA TGTGAGCGAC CTTGTGGGCT GCGAGCTCTT TGAGATTCAT
GGTTCGGAAG CGCGAAAGGT CGGCGTTGTA GCAGACGTCG ATTTCAGCGC CGGCGAAGCG
CCGCTGCTTG TCGTCAAAGG GGATCGCGAA CATCTCATCC CCTACGTCGA GAGCTTCTTG
AAGTCGACAG ACTTCAAAGC CAAGCGCATC GAGATGGTGT TGCCGCAAGG CATGCTCGAA
CTCGATGCCC CGCTCTCGAA AGCCGAGAAG GAGCGCCAGA AGTCCGAGGC CGACGAGACC
CGTGAGGCAG GCGAAAGGCG GAAACGATGA
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| Protein sequence | MSSTSSTNTD DFITIARIQK TQGRVGEVFS ELFTDFPELF EQRHHLYVLP EKGERRELEL
EDHWFHKGGV VLKFQGIETI DDAEKLLRSE VQIPRQDRAQ LEEGATYVSD LVGCELFEIH
GSEARKVGVV ADVDFSAGEA PLLVVKGDRE HLIPYVESFL KSTDFKAKRI EMVLPQGMLE
LDAPLSKAEK ERQKSEADET REAGERRKR
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