Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2860 |
Symbol | |
ID | 4070379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 3403924 |
End bp | 3404826 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637984878 |
Product | tyrosine recombinase XerC subunit |
Protein accession | YP_591935 |
Protein GI | 94969887 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTCT CGCAGGTGGA AAAGGGAGTC GCCCAATTTC TTCGCTCGTT GAAAGAGAAG AACTCGTCGG TGCACACGAT CAAGGCCTAC ACCACCGACC TGGAAGAATT CTCAGCTTTC CTCGGTCCAG CGAAGTGGGA CGACATTGAC CACGTCCGGA TTCGCGGCTT CCTGTCGCAT CTCTACGACA AAGGCCTGAG CAAGCCCTCT GTAGCGCGGG CACTGGCGGC GCTAAGGTCT TTATATAAGT GGCTGGCGCG AGAGGGATTC GTGGAGCAGA ACCCGGCGGC GCTGGTAGCT ACGCCAAAGC TCCCTAAAAA ACTGCCTCGT GTGCCGACCA TGGAAGAGCT GAACACGGTC ATGGACGCCG AGATGCCGGA GGCCGCAAGC TTTCCCGAGC GCGATGCGCT GATTTTCGAA CTGCTATATG GCTGTGGAAT TCGCAACTCG GAGCTCACCG GCATTAATCT CGACGACATC CGCTGGTCAA ACGAAGCGAT TCTCATCCGA GGCAAGGGCA AGAAGGAGCG CTTCGTCCCA TTCGGCGACG CCGCCGCAGT CGCCGCCAAG GTCTATCTGA AGAAACGACA GGACATACTC GCCGAGCGAC ATAAATCCAC GAACGCCCTG CTGATCAACC TGCGCGACGT CCAGCGGCTG ACCTCACGCA GCGTGGGACG CATCGTGAAA AAAATCGCCG TGGCGCGCGG ACTTCCAGCC GACGTTCATC CTCACACCTT GCGCCACGCC TTCGGCACGC ACCTCCTCGA AGAGGGCGCC GATCTGAGGG CAATCCAGGA GTTGCTCGGC CACGAGCGGC TCGCGACGAC CCAGCGTTAC ACGCAACTTT CAACTCGCCA CGTGCTCGAG GTCTACGACA AAACCCATCC GCGCGCCAAG TAA
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Protein sequence | MSVSQVEKGV AQFLRSLKEK NSSVHTIKAY TTDLEEFSAF LGPAKWDDID HVRIRGFLSH LYDKGLSKPS VARALAALRS LYKWLAREGF VEQNPAALVA TPKLPKKLPR VPTMEELNTV MDAEMPEAAS FPERDALIFE LLYGCGIRNS ELTGINLDDI RWSNEAILIR GKGKKERFVP FGDAAAVAAK VYLKKRQDIL AERHKSTNAL LINLRDVQRL TSRSVGRIVK KIAVARGLPA DVHPHTLRHA FGTHLLEEGA DLRAIQELLG HERLATTQRY TQLSTRHVLE VYDKTHPRAK
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