| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2832 |
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| Symbol | |
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| ID | 4071835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 3368630 |
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| End bp | 3370192 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637984850 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_591907 |
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| Protein GI | 94969859 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTCA AGTTTCGAAA GATTGCAACT ACGCTGCCGC TGCTGGCCAT GGCCTGCCTG
TCGGCGTGCG TAGTGGGACC GAAGTATCAC AAGCCGGCCG TGGACGCTCC GCCGTCTTAC
AAAGAAGCCA CACCATCAGC GCAAAGCGCA CAGCCGGCTC CGGGTGCACC TGCTCCGACG
TGGCAACCCG CCAGCCCCAA CGACGCGATG CTCAAGGGCA AGTGGTGGGA AATTTATAAC
GACGCCGACT TGAATAAGCT CGAAGAAGAA GTCAACGTCT CGAACCAAAG CGTCAAGGCT
GCGGAGGCAA GCTTTCTCGG AGCACGTGCA CTGGTAAAAC AAGCGCGAGC AGCGTACTTC
CCTACAATCG GCGTCTCGCC GAGCATCACC GCAACCCGTC AGCTTTCGGT TGATAGCAAC
GGTAAGGTGA CCGGCGGTAC CGGCACGGAT TTCGATTTCC CCGCCAACGC AGCCTGGGTC
CCGGATATTT GGGGCAAAGT TCGTAACCAG GTTCGCGCGC AAGCTTCCGC GGCACAGATG
AGCGCAGCGG ATTTAGAGAA CATCCGCCTC TCCCTCCAGG TCGAAGTCGC CAACAACTAC
TTCCAGTTGC GTTCGCAAGA TGCCTTGAAA GATCTGCTCG ACGCAACGGT CAAGGCGTAT
CAGGAATCTG TCGACTTGAC GCAAGCGCTG TACGAGACGG GTATCGACTC GCAGGAATCA
GTGCTGCAAG CCGAGACGCA GTTAGCCACC GCTCAGGCGC AAGACACGAA CGTTGGCATC
CTGCGCGCGC AGTATGAACA TGCCATCGCG ATGCTGATCG GCAAACCAGC TTCACAGTTT
TCCCTGGCAC ATCTGCCGCT GAGTTCTGAG CCTCCGTCAA TTCCCATCGG AGTTCCCTCG
AACCTGCTCG AGCGGCGGCC TGACATTGCC TCCGCGGAAC GCAGCATGGA GCAGTCGAAT
GCGTTGATCG GGGTGGCAGT CGCAGCGTAT TACCCGAACG TCACCCTCAG CGGCACATTT
GGCTTCCGCA ATACGTCAAT CGCCGATTGG TTCACCTGGC CGAGCCACTA TTGGTCTGTT
GGTCCGCAGT TGGCGCAGAC AATTTTTGAA GGCGGCCTGC GCAAGGCCAC AGTTGTCCAG
GCCCAGGCGC AATACGATCA GTCGGTCGCC AACTATCGTC AAACCGTGCT CACCGCTTTT
CAGCAGGTGG AAGACAATCT CGCAGCGCTG CGGATTCTCT CGCAGGAAGT GCAGCAGCAA
GCGGCGGCAG TGGACTTCGC GCAGAAGAAC CTGAACCTGG CGATCGATCG CTACAAGCTG
GGCATCGATC CGTACCTGAA CGTGCTCACG GCGCAGACGA CGCTGTTCTC CAATCAGCAG
GGCCTGGTGC AACTCAAGCT GCAGCAGATG AACGCCAGTG CGCAGCTGAT TGAGGCGCTC
GGCGGAGGTT GGGACACTTC TCTGCTACCG TCGAAGAAGG ACGTGCAATC GCTCGGTCCG
GTGCAAACCA ACCCGGCACC ACCCAGCCAA TCTGGGCAAA ACCAGACGCC CCCGACACGC
TAA
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| Protein sequence | MNFKFRKIAT TLPLLAMACL SACVVGPKYH KPAVDAPPSY KEATPSAQSA QPAPGAPAPT
WQPASPNDAM LKGKWWEIYN DADLNKLEEE VNVSNQSVKA AEASFLGARA LVKQARAAYF
PTIGVSPSIT ATRQLSVDSN GKVTGGTGTD FDFPANAAWV PDIWGKVRNQ VRAQASAAQM
SAADLENIRL SLQVEVANNY FQLRSQDALK DLLDATVKAY QESVDLTQAL YETGIDSQES
VLQAETQLAT AQAQDTNVGI LRAQYEHAIA MLIGKPASQF SLAHLPLSSE PPSIPIGVPS
NLLERRPDIA SAERSMEQSN ALIGVAVAAY YPNVTLSGTF GFRNTSIADW FTWPSHYWSV
GPQLAQTIFE GGLRKATVVQ AQAQYDQSVA NYRQTVLTAF QQVEDNLAAL RILSQEVQQQ
AAAVDFAQKN LNLAIDRYKL GIDPYLNVLT AQTTLFSNQQ GLVQLKLQQM NASAQLIEAL
GGGWDTSLLP SKKDVQSLGP VQTNPAPPSQ SGQNQTPPTR
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