Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2831 |
Symbol | |
ID | 4071834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 3365517 |
End bp | 3368615 |
Gene Length | 3099 bp |
Protein Length | 1032 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637984849 |
Product | acriflavin resistance protein |
Protein accession | YP_591906 |
Protein GI | 94969858 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATATCT CCCGCCCGTT CATTTATCGT CCGGTAGCCA CCACGCTGAT CACCATCGCG ATCGCGTTGG CGGGTGCGGT GGCCTTCGGC TTTTTACCGA TCTCACCGTT GCCGCAAGTG GACTTCCCGA CGATCAACGT ACGCGCGGGT CTGCCGGGAG CAAGCCCCGA GATCATGGCG TCGTCGGTCG CGACGCCGCT CGAGCGCCAA CTCGGGCACA TCGCCAGTGT CACCGAGATG ACGTCTTCGA GCAGCCTGGG ATCGACCACG ATCACGTTGC AATTCGACTT GAACCGCGAC ATCAACGGTG CGGCGCGCGA CGTACAAGCC GCGATCAACG CGGCGAGAAG TTACCTCCCC GCGAACCTGC CATCGAACCC GACCTACAAC AAGTCGAACC CCGGTGACGC GCCGATCGTC ATTCTCGCCA TGACGTCGAA GACGTACACC CGCGGCCAGA TGTATGACAT GGCGTCGAAC ATCCTGGCAC AGCGCATCTC GCAAATCAGC GGTGTTGGGG AAGTGGACGT CGGCGGTAGC TCGCGACCTT CGGTGCGAGT GGAATTGAAT CCGTCGCAGT TGGACCACTA TGGCATCGCC ATCTCGCAAG TTGCGAACAT GCTGCGCGCG CAAAACGCGA ACCTCGCCAA AGGACAGCTC TCCAATGGCG AAACCACCGC CGACATTCTC GCCAATGACC AGATGCTGCT GGCGATGCAG TACAAGCCAC TGGTCGTCGG CTACCGCAAT GGTTCTGCGA TTACATTGTC GGACGTCGCC GATGTTACGG ATTCGGTCCA GGACCTCCGG CAAGCGGGCT ACGTCAACGG CAAACCCGGT ATTTTGCTCA TCGTCCGCCG GCAACCAGGC GCGAACATCA TTGCCACCGT GGACGCGATC AAGGATACGA TCCCTGAACT GCAAGCCTCG ATTCCGACCG GCATGAATCT GCAGGTGGTG CTCGACCGAA CCACCACCAT CCGGCAGTCG GTGCATGACG TCGAGCGGAC GCTGATCATT TCGATCATGC TCGTCATTGT TGTCGTCTTC GTTTTCCTGC GAGATGTGCG CGCGACGTTC ATTCCGAGTG TGGTTGTACC GGTATCGCTT ATCGGCACCT TCGGAATCAT GTACCTGTGC GGATTCAGCA TCGACAATCT TTCGCTGATG GCGCTGACGA TTTCGACCGG CTTCGTAGTG GACGATGCCA TCGTGGTGAT CGAGAACATC ACGCGCTACA TTGAAGAAGG CATGGCGCCG ATGCAAGCGG CGCTGCGCGG CGCAAGCGAG ATCGGCTTCA CGGTCATGTC GATCAGCATC TCGCTGGTCG CCGTGTTCAT TCCTATCCTG ATGATGGGCG GCATCGTGGG GCGGCTCTTC CGCGAGTTTG CGGTGACGCT CTCCGCTGCA ATTGTCGTTT CTATGGTGGT GTCGCTCACC GCCACGCCAA TGATGTGCTC GCGGCTGCTC AAACATCGCG ACGAGCAGAA GCATGGAAAG ATCTACCTCT GGAGCGAAAA TCTTTTCAAA GGAATGGCGA GCATCTACGA GCGCAGCTTG CGATGGGTGC TGGACGCTCC CGCATTCGTG CTCGCAATTT TGATCCTCAC GGTCGCCGTG AACATCTACC TGCTGATCAT TGTGCCCAAG GGCTTCTTCC CGCAGCAGGA CAATGGAACG ATCTTCGGTG GAGCGCAGGG CGCGCAGGAC ATCTCGTTCC AGTCGATGTC GAAGATCATG CTCGAGTTCG TGGATCGCAT CAAATCTGAT CCGGCGGTTG ATAACGTAAT GGCGTTTACC GGTGGAAGCA ACACCAACGG CGGATTCATC TTCCTCGGGC TGAAGCCATT AAAAGAACGC AAGCTGAGCG CGACCGAGAT CGTGAACCGA TTGCGGCCGA AGTTGCTATC GTTGCCCGGT GCCAGCGCGT TCGTCCAGGC CGGACAGGAC CTTCGCATTG GCGGTCGCGG CAGCAACGCG CAATATCAGT ACACCTTACA GGCCGACAAC GTCGCCGACC TCGTGAAATG GGGACCGATT CTCGCCAAGG AGATGAAATC CCTGCATGGC TTCGCGGACA TCAATAGCGA CCAGCAAAAT TCGGGATTAC AAGCGATGCT GGTCTACGAC CGGCCGACGG CGTCGCGCCT CGGCATAACC CCGCAAATGA TCGATCAGGA ACTCTATCAA TCGTTCGGTC AGGCGCCAGT CTCGACCATG TACCGATCGC TGAACCAGTA TTACGTGGTG ATGGAAGTAG CGCCCGCCTA TTGGCAAACG CCGGAAGCGC TTAAGAATGT TTATGTGCAT CCTGCCAACG GAAAGCCAGT ACCGCTGAGC GCAATTGCGC ATCTTGCGTA CAACACCGCA GCTCTCCAGG TGAACCACCA GGGGCAGTAC CCTTCGGTGA CCATTTCCTT CAACCTGGCG CCGGGCGTAG CTCTCAGCGA TGCGTCCGGA CGCCTGCTGC AGTTGGAGCA AAGCCTCGGA ATGCCGCCGA CGATTCACGG CATGTTCTCA GGAACGCTCC AGGCGTTTCA GGATTCTCTC TCGTCAGAGC CGATTTTGAT CATTACCGCC GTGTTAGCGG TATTCATTGT GCTGGGCATC CTTTACGAGA GCCTGATCCA CCCCGTCACC ATTCTGTCTA CCATTCCATC GGCGGGCGTA GGTGCGGTGT TGGCGCTGAT GATCTTTAAG GCTTCGCTCG ACGTCATCGG CATTATAGGA ATGATCCTGC TGATTGGCAT CGTGAAGAAG AACGCCATCC TGATGATTGA CTTTGCGCTC GCCGCCGAAC GCGAAGAGGG TATGAATTCC AGGGATGCCA TCTTCCGCGC CTGTATGTTG CGCTTCCGCC CAATCCTTAT GACCACCATG GCCGCCATGC TCGGCGCGAT GCCGTTGGCC CTGGGAACAG GCGCTGGATC CGAATTACGT CGACCGCTGG GCATCACGAT CGTTGGCGGA CTCATCTTCA GCCAAATGCT GACGCTCTAC ACCACTCCGG TCGTTTATCT CTACATGGAA CGCTTTCGCC TATGGGTAAT TCGCATACGC CAAGGCAGCA CGGTTACGCC GCGCGAGAGC GAATCATGA
|
Protein sequence | MNISRPFIYR PVATTLITIA IALAGAVAFG FLPISPLPQV DFPTINVRAG LPGASPEIMA SSVATPLERQ LGHIASVTEM TSSSSLGSTT ITLQFDLNRD INGAARDVQA AINAARSYLP ANLPSNPTYN KSNPGDAPIV ILAMTSKTYT RGQMYDMASN ILAQRISQIS GVGEVDVGGS SRPSVRVELN PSQLDHYGIA ISQVANMLRA QNANLAKGQL SNGETTADIL ANDQMLLAMQ YKPLVVGYRN GSAITLSDVA DVTDSVQDLR QAGYVNGKPG ILLIVRRQPG ANIIATVDAI KDTIPELQAS IPTGMNLQVV LDRTTTIRQS VHDVERTLII SIMLVIVVVF VFLRDVRATF IPSVVVPVSL IGTFGIMYLC GFSIDNLSLM ALTISTGFVV DDAIVVIENI TRYIEEGMAP MQAALRGASE IGFTVMSISI SLVAVFIPIL MMGGIVGRLF REFAVTLSAA IVVSMVVSLT ATPMMCSRLL KHRDEQKHGK IYLWSENLFK GMASIYERSL RWVLDAPAFV LAILILTVAV NIYLLIIVPK GFFPQQDNGT IFGGAQGAQD ISFQSMSKIM LEFVDRIKSD PAVDNVMAFT GGSNTNGGFI FLGLKPLKER KLSATEIVNR LRPKLLSLPG ASAFVQAGQD LRIGGRGSNA QYQYTLQADN VADLVKWGPI LAKEMKSLHG FADINSDQQN SGLQAMLVYD RPTASRLGIT PQMIDQELYQ SFGQAPVSTM YRSLNQYYVV MEVAPAYWQT PEALKNVYVH PANGKPVPLS AIAHLAYNTA ALQVNHQGQY PSVTISFNLA PGVALSDASG RLLQLEQSLG MPPTIHGMFS GTLQAFQDSL SSEPILIITA VLAVFIVLGI LYESLIHPVT ILSTIPSAGV GAVLALMIFK ASLDVIGIIG MILLIGIVKK NAILMIDFAL AAEREEGMNS RDAIFRACML RFRPILMTTM AAMLGAMPLA LGTGAGSELR RPLGITIVGG LIFSQMLTLY TTPVVYLYME RFRLWVIRIR QGSTVTPRES ES
|
| |