| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2829 |
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| Symbol | |
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| ID | 4071832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 3360937 |
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| End bp | 3362238 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637984847 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_591904 |
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| Protein GI | 94969856 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAAC GTCTAGTCAC ACCTGAAACT TCTACCAGCG CACAAGCCGC ACCTCCAGAA
CACTCCCATC GCGGACGCTG GCTGATTTTT GTCGGAATTT TGTTAGTGGT CGCTTTGTTG
GCGTATTACT TCCATGAGAG AGGTTCCGCG CAGCCAACTA CGCAAGGCCG CGGTGGCCGT
GGCGGCGCGG GTGACCGTCC GGTGCCGGCA ACTGTCGCGC AGGCGCAACA AGGCGACATG
GGCGTGTTCG TGGAGGCGTT AGGCACCGTC ACTCCCGTGC AGACGATCAC AGTTACGAGC
CGGGTGCAGG GACAGATCAT GGCCGTGCAC TATCGCGAAG GTCAAATGGT CCGCAAGGGC
GAGCCGCTGA TTGACATTGA CCCTCTTCCA TACCAGGCAG TGTTGACGCA AGCCGAAGGT
CAGTTGGCGC GTGACAAAGC GCTTTTAGAA GGCGCGCAGA TCAACGTAAA GCGCTACCAG
GCGGCGTTGG CCCGCAATGC CATCGCGCAA CAGACGGTCT CCGATCAGGA ACAGCTGGTT
CGGCAGTACG AAGGCGCGGT GAAGGTCGAC GAAGGACTGG TGCAGGCGGC GCAGGTAAAC
CTGTCGTACT GCCACATTGT GTCGCCGATT GATGGCCGCG TGGGCTTGCG ACTGGTGGAT
ACCGGCAACA TCGTGCAGGC CAACAGCACG ACTGCACTTG TGGTTGTCAC TCAACTGACG
CCGATCACCG TGATCTTCAG CGTGGCGGAA GACTACCTAC CGCAGATCCA GGCGCAGACG
AAGAACGGCA ACAAACTGGC TGTGGATGCG CTCGACCGCA CGCAGGAAAC AGAGATCGCG
CACGGCACGC TTGCCAGTCT CGATAACCAG ATCGATTTGA CGACCGGTAC GCTCAAACTG
CGCGCGGAAT TCGCGAACAA AGACGGCTCG CTTTTCCCGA ACCAATTTGT AAACGCAAAG
CTGCTGATCA ATACGCTCCA CAGCACCACG CTGATCCCGA ACCAATCCAT CCAACAGAGC
TCGCAAGGTC CGTTTGTGTA TGTGGTGGGC AGCGATACCG TGGCGAAGGT CCGGCAGATC
AAGACGGCTG CGACGGACGG GACGAATACA TCCGTCACGG GCGTACAGCC GGGTGAATCC
GTAGTGACGG CGGGCTTTGA CAAGTTGCAA GACGGAAGCA AAGTCGCCAC CGGGCAGCAG
GGTGGATCCG GAGGTCAAGG CAACAATCCG AACCCCGGCT CCGGCAAGAA CGGACGCCAA
GGTGCGCCGG ATGGCCAAAA CGGCGGAAAG CCGGCGAAAT GA
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| Protein sequence | MPERLVTPET STSAQAAPPE HSHRGRWLIF VGILLVVALL AYYFHERGSA QPTTQGRGGR
GGAGDRPVPA TVAQAQQGDM GVFVEALGTV TPVQTITVTS RVQGQIMAVH YREGQMVRKG
EPLIDIDPLP YQAVLTQAEG QLARDKALLE GAQINVKRYQ AALARNAIAQ QTVSDQEQLV
RQYEGAVKVD EGLVQAAQVN LSYCHIVSPI DGRVGLRLVD TGNIVQANST TALVVVTQLT
PITVIFSVAE DYLPQIQAQT KNGNKLAVDA LDRTQETEIA HGTLASLDNQ IDLTTGTLKL
RAEFANKDGS LFPNQFVNAK LLINTLHSTT LIPNQSIQQS SQGPFVYVVG SDTVAKVRQI
KTAATDGTNT SVTGVQPGES VVTAGFDKLQ DGSKVATGQQ GGSGGQGNNP NPGSGKNGRQ
GAPDGQNGGK PAK
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