| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2818 |
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| Symbol | |
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| ID | 4071821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 3345053 |
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| End bp | 3346183 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637984836 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_591893 |
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| Protein GI | 94969845 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.68617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAGT TCCCAATCAT TTCCACCGCA CTTCTTGCCG CTCTCGGCCT TGCAGTGCTC
TCGGCTTGTG GCCGCTCCGC GCAGGGCGGT GCACCGCAGG GCTTCCCGGC GATGCACGTG
CAAACACAGC CCGCGCTGGC GCAGAACGTC GGCGACTTCA CCGAGTATCT TGCCACGATT
AAATCGCGCG GCTCATCCAT CCTCCAGCCC GAAGTCGAAG GTCAGATCAC GCAAATTTTT
GTAAAGTCCG GCCAGCACGT TCAGCCCGGC CAAGTGCTGA TGGAAATCGA TCCCCGCCGT
CAGGCCGCGA CTGTCAGTTC GCAGGAAGCC AACGCGAATT CCAAGCGCGC TAATCTCGAT
TGGGCTTCCA AGGAACTCGA ACGTCGTAAG GGTCTCTATG CGGCGGGCGT CATCAGCCGA
CAGGACCTCG ACCAGGCGCT GACCTCCTAC GACGCCGCCA AGGCCGACCT TACTGCCATG
GATGAGACCG TCAAGCAGCA GAAAGTCCAG CTCCACTACT TCTCGGTCTA CGCTCCCACC
GCCGGCATCG TTGGTGACAT CCCCGTTCGT GTCGGCGATC GCGTCACTGT CGCTACCGTG
CTCACAACGC TCGACACCGG CGCCGGCCTC GAAGCCTATA TCTCCGTCCC CGCAGAAAAA
TCGGCCGACG TGAAGCAAGG CATGCCCGTA ACCCTCGCTA CCTCCGATGG CAAGACCGTT
GCGACCACGA TCTCTTTCAT CTCGCCGCGT GTCGATCCCG CGACTCAATT GCTCCTCGTG
AAGGCCAACG TTCCCGCGAG CAGCGACTTC CGCAACGATC AAGTCATCCA CGCGCGCGTG
ATCTGGAAAT CCGTCTCGCG TCCCACTCTG CCCGTCACCG CGGTTTCGCG CATCGGCGGA
GCGACCTTCG CGTTCGTCGT TGGCGACAAC AAGGGCCAGG CCGTCGCTCA GCAGCGCTCG
GTGCAACTCG GTGAGATCGT CGGCAACAGC TACACCGTGC TCGGCGGCAT CAGCCCCGGC
GACAAGGTCA TCGTCAGCAG CGTCAACATG CTGGTGGACG GCATGCCCAT AGTTCCCGAA
ACTGCCAGCC AGAATCCGGC TGCGCCATCT GCGGCAGGTC CGCAGTCCTA G
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| Protein sequence | MPKFPIISTA LLAALGLAVL SACGRSAQGG APQGFPAMHV QTQPALAQNV GDFTEYLATI
KSRGSSILQP EVEGQITQIF VKSGQHVQPG QVLMEIDPRR QAATVSSQEA NANSKRANLD
WASKELERRK GLYAAGVISR QDLDQALTSY DAAKADLTAM DETVKQQKVQ LHYFSVYAPT
AGIVGDIPVR VGDRVTVATV LTTLDTGAGL EAYISVPAEK SADVKQGMPV TLATSDGKTV
ATTISFISPR VDPATQLLLV KANVPASSDF RNDQVIHARV IWKSVSRPTL PVTAVSRIGG
ATFAFVVGDN KGQAVAQQRS VQLGEIVGNS YTVLGGISPG DKVIVSSVNM LVDGMPIVPE
TASQNPAAPS AAGPQS
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