| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2817 |
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| Symbol | |
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| ID | 4071820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 3341906 |
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| End bp | 3345037 |
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| Gene Length | 3132 bp |
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| Protein Length | 1043 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637984835 |
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| Product | hydrophobe/amphiphile efflux-1 HAE1 |
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| Protein accession | YP_591892 |
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| Protein GI | 94969844 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.702974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGTCA ATTTCTTCAT CCGCCGCCCG GTCTTCGCGA CGGTCTGTTC GCTGCTGATC
ATCCTCGCCG GTGCCATCGC GATCCCCACG CTGCCCATCG CGCAGTTCCC GCAACTCGCC
CCGCCGCAAG TAACCGTCAC CGCGTTCTAT AACGGCGCGA ACTCGCAGGC CGTCGAAACC
AGTGTCACCA CTCTCCTCGA ACAGGCCATC AACGGCGCCG AGGGCATGAA CTACATCAGT
TCCGTCAGCG GCAACGACGG CACCAGCCAG ATCACCGCGA CCTTCCATCT CGAGCGCAAT
CTCGACATCG CTGCGGTTGA CGTGCAAAAC CGCGCCTCCA GCGCTCTCGG CCGTCTCCCT
GCGGAAGTTC AGCAGACCGG CGTCACCGTC GGAAAGAACT CCGGCACCTT CATCATGGCC
GCCGGCTTCT ACTCCGACAA AGGTCAGTAC GATCAGCTCT TCATCAGCAA CTATCTCGAC
CTCTACGTGC GCGACGCGCT GAAGCGCATC AAGGGCGTCG GCGACGTCAT CATCTTTGGC
GAGCGCAAGT ACGCCATGCG CCTCTGGCTC GATCCCGTTC GCCTTGCCAA GCGCAGCCTG
ACCGCACAAG ACGTCGTGAA CGCTCTCCGT GAGCAAAACG TCCAGGTTGC TGCCGGACAA
GTCGGCCAGG CCCCGATCGC CAAAGGCCAG AACTTCCAGA TCAGCGTTCG AGCTGTCGGA
CGTCTCCGCG AGGCCAAGGA ATTCGAAGCA ATCATCCTGA AACGCGGCGC CGACGGATCT
TTGGTCCAGC TACGCGATGT CGGCCGCGCC GAACTTGGTG CCGAAAGCTA CGCCGGCAAC
CTCTCGTACA ACGGCTACGA TGCCATCGGT ATCGGCGTCC AGCAGCTTTC TACCGCCAAC
GCGCTCGATG TGGACAAGGC CGTTAAAGAC GAACTGAGCC GCCTCTCGGC AAAATTCCCG
CCGGGACTGA AGTACCAGAT CGCCTTCGAC ACCACCACCG CCGTCGGTGA ATCCATCCGC
GAAGTGCTCA CGACCCTCGT GGAAGCCATC ATTATCGTCA TTCTCGTGAT CTTCCTCTTC
CTCCAGAGCT GGCGCAGCAC GCTCATTCCA GCCATCACCA TCCCGGTCTC GCTGATCGGC
ACATTTGCGT TCGTCAAGCT CTTCGGTTTC TCCATCAACA CCCTCACCCT CTTCGGCATT
ACGCTCGCCA CCGGCCTCGT CGTGGACGAC GCTATCGTCG TCATCGAGAA CGTCGAGCGC
CACCTCGAAG AAGGCATTCG CGATCCGCGT CGTGCCTCTG AAGTCGCCAT GGGCGAAGTC
ACCAGCGCCG TTATCGCAAC GTCGCTCGTG CTTATCGCCG TCTTCATCCC GATCTCGTTG
TTCCCGGGAT CAACGGGCCG CCTCTACCAG CAGTTCGCCC TTACCATCGC TTTCTCCATT
GGCCTTTCGG CATTCAACGC GCTCACGCTT ACACCAGCGC TGTCCGCGTT GTTGCTGCGT
CATAGCAGCG AGAAGAAGAA CCCGATTTTT CGCGGATTCA ACGCCATCAT CTCTGGCGGC
ACCAAGGGGT ATACCGGAAT CTTGCAGAAG TTGGAACGCG CCAAGCTCCC AGTCTTCGCT
GTCTTCGTGC TCGGACTGGT CGCAGCCTGG TACATCTATC GAATCGTGCC AACGAGCTTT
GTCCCCGACG AAGATCAGGG CTACCTCATG GCGCTCGTGC AAACGCCGGA AGGCGCTTCG
CTCGAGTACA CGACACAGAA AACTCGCGCT GCCGCCGCGA TTCTCGCCGC GAATCATGAC
ATCAATGGTG TCTTCGCCGT CCCGGGTTTC AGCTTCACCG GAGCGGCGCC CAACCGCGCC
ATGATCTTCG CGAACCTGCG TCCGTTCGGT GAACGAAAAG GAAATCAGCA CACCGCAGCC
GCCGTCCTGA ATTCCGTACG CGGCCCGCTT CTCTCCATTC CTGACGCGCT GGTCATCCCG
CTCGCACCGC CCGCCATTCA AGGTCTCGGC GCGTTCGGCG GCTTCCAATT TCAACTCGAG
CAGACTGGTT CCGGTTCGCT TGAGGACATG CAGAATGTGC TGAACGGTTT CCTCATGAAG
GCCCGCGGCC GCAAGGAACT CACCGGCCTC TTCTCCACCT TTAGCGCGCG CGATCCGCAG
TTCGAGGTCA ACGTCGACCG CGAAAAAGCC AAGAGCCTCG GTGTCTCGTT TACCGAAATA
TCGTCGGCCC TCCAGGTCTT TATGGGTTCG CAATACGTCA ACGACTTCGA TTTCAATAAT
CGTTCCTACC GCGTCTACGT GCAGGCCGAT GAGCAATACC GCCGCCAACC CCGCGATCTC
CGCGAGTTCT ACGTGCGCTC CGATTCCGGC CAGATGGTCC CGCTCGATAA CCTCGTGACG
GTCAAGGAAA CTACGACCTC ATCAGTCATC GAGCACTACA ACATTTTCCG CACCACCGCG
ATCAACGGCG CCGCCGCGCC CGGCTACAGT TCCGGCCAGG CGATTGCTGC CATGGAAGAC
CTCGCGAAAC AAGCGCTCCC TGTTGGCTAC ACGTTTGAAT GGACCGGGCT CACTCTCGAA
GAAATTCAGT CCGGCAGCCA GGCGATCATT CTCTTCGCGC TAGGCTTGCT CGTCGTCTAT
CTCACTCTCT CCGCACAGTA CGAAAGCTTC GTGCTGCCGT TCATCATCTT GCTCGCCGTG
CCCATGGCCA TCTTCGGCGC GCTTGGCGCG CAGTTCCTCC GTGGCCAGCA AAACGATGTT
TACTGCCAGA TCGGTCTGGT GATGTTGATC GGTCTCGCCA GCAAAAACGC GATCTTAATC
GTCGAATTTG CCGAGCAGTT ACAGATGAAA GGCATGGGTC TCTTCGAATC CGCGGTCGAA
GCCGCGCGTC TTCGCCTTCG TCCGATTCTC ATGACCTCCA TCGCGTTCAT CCTCGGCGTA
CTCCCGCTGG TCTTCGCTAC GGGCGCCGGT TCCGCCGGAC GCAACTCCGT CGGCACCACC
GTCTTCGGCG GCATGATCAT CTCCACTTTC CTCAACCTCT TCATCATCCC GATTCTTTAC
GTGATCGTGC GCTCGTTCCT TCCGGCCCCA ATTAACGCAG TCGAGCCGAT CCCGAACCCC
GAGGGCGACT AA
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| Protein sequence | MFVNFFIRRP VFATVCSLLI ILAGAIAIPT LPIAQFPQLA PPQVTVTAFY NGANSQAVET
SVTTLLEQAI NGAEGMNYIS SVSGNDGTSQ ITATFHLERN LDIAAVDVQN RASSALGRLP
AEVQQTGVTV GKNSGTFIMA AGFYSDKGQY DQLFISNYLD LYVRDALKRI KGVGDVIIFG
ERKYAMRLWL DPVRLAKRSL TAQDVVNALR EQNVQVAAGQ VGQAPIAKGQ NFQISVRAVG
RLREAKEFEA IILKRGADGS LVQLRDVGRA ELGAESYAGN LSYNGYDAIG IGVQQLSTAN
ALDVDKAVKD ELSRLSAKFP PGLKYQIAFD TTTAVGESIR EVLTTLVEAI IIVILVIFLF
LQSWRSTLIP AITIPVSLIG TFAFVKLFGF SINTLTLFGI TLATGLVVDD AIVVIENVER
HLEEGIRDPR RASEVAMGEV TSAVIATSLV LIAVFIPISL FPGSTGRLYQ QFALTIAFSI
GLSAFNALTL TPALSALLLR HSSEKKNPIF RGFNAIISGG TKGYTGILQK LERAKLPVFA
VFVLGLVAAW YIYRIVPTSF VPDEDQGYLM ALVQTPEGAS LEYTTQKTRA AAAILAANHD
INGVFAVPGF SFTGAAPNRA MIFANLRPFG ERKGNQHTAA AVLNSVRGPL LSIPDALVIP
LAPPAIQGLG AFGGFQFQLE QTGSGSLEDM QNVLNGFLMK ARGRKELTGL FSTFSARDPQ
FEVNVDREKA KSLGVSFTEI SSALQVFMGS QYVNDFDFNN RSYRVYVQAD EQYRRQPRDL
REFYVRSDSG QMVPLDNLVT VKETTTSSVI EHYNIFRTTA INGAAAPGYS SGQAIAAMED
LAKQALPVGY TFEWTGLTLE EIQSGSQAII LFALGLLVVY LTLSAQYESF VLPFIILLAV
PMAIFGALGA QFLRGQQNDV YCQIGLVMLI GLASKNAILI VEFAEQLQMK GMGLFESAVE
AARLRLRPIL MTSIAFILGV LPLVFATGAG SAGRNSVGTT VFGGMIISTF LNLFIIPILY
VIVRSFLPAP INAVEPIPNP EGD
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