Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2809 |
Symbol | |
ID | 4071812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 3331113 |
End bp | 3331562 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637984827 |
Product | ribose-5-phosphate isomerase B |
Protein accession | YP_591884 |
Protein GI | 94969836 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family [TIGR01120] ribose 5-phosphate isomerase B |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.119147 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGTCG CAGTCTCAGC CGATCATGCC GGCGTCCCGA TGAACGAGGT CGTCATTGCC GAGTTGCGGA AACTCGGGCA CGAGGTGCTC GATCTTGGCA CCCACGACCC GAACTCCGGC GACGACTACC CCGACCGCGC TGCCGACATT ACAGCAGCAG TGTTGAATCA AGGCTGCGAA AGAGGCATCC TGATTTGTGG CAGTGGTGTG GGCGCTTCGG TGGCTGCGAA CAAAATTAAG GGGATCCGGG CCGGACTCTG CCACGACCAC TACTCCGCCC ATCAGGGCGT GGAACACGAC AACATGAACG TACTTTGCCT GGGCGGACGC GTGATTGGGA CGGAAACAGC GCTCGATCTC GTCCGCGCTT TCGTGTCGGC AAAGTTCACC AACGAAGAGC GCCACTTGCG GCGCCTCCAC AAGATCGCAG TCATGGAAGG ATCGAGGTAA
|
Protein sequence | MKVAVSADHA GVPMNEVVIA ELRKLGHEVL DLGTHDPNSG DDYPDRAADI TAAVLNQGCE RGILICGSGV GASVAANKIK GIRAGLCHDH YSAHQGVEHD NMNVLCLGGR VIGTETALDL VRAFVSAKFT NEERHLRRLH KIAVMEGSR
|
| |