Gene Acid345_2790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_2790 
Symbol 
ID4072413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3302066 
End bp3303490 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content62% 
IMG OID637984808 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_591865 
Protein GI94969817 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACC AGAAAACTCC CAACATCGCT GTCATCGGTG GCGGCCCCGG CGGTTATGCC 
GCTGCGTTCC TCGCCGCCGA CCTCGGCATG ACCGTCACCC TCATCGACAT GGAACTCAAC
CCCGGCGGCG TCTGCCTCTA CCGCGGCTGC ATCCCGTCGA AGGCGCTCCT CCATGTCGCC
AAGTTGATCG AAGAAGCCAA GCACTCCACG AACTGGGGCG TCACCTACGA CGCGCCGAAG
ATCGACCTCG AGCGCCTGCG CACCTTCAAG GAAGGCGTGG TCAAGAAGCT CACTGGCGGA
CTCGGCCAGC TCTCGAAGCA ACGCAAGGTC ACCTACATCC AGGGCAAAGC CACGCTCGTC
GACTCCTGCA CCGTCAAGGT CGAGAAGACC GCAGGCGGTG AAGAGACGCT GCACTTCGAT
AAGCTCATTC TCGCCACCGG CTCCCGCCCC GCGGTCATAC CGGCGTTCAA CATCGGCTCA
CCGCGCGTGA TGGATTCCAC TGGCGCGCTC AACCTCGAAG ACATTCCCAA GCGCCTGCTG
GTAGTCGGCG GCGGCTACAT CGGGCTCGAA CTCGGCTCCG TCTATGCGGC CATCGGCAGC
AAGGTCAGCG TCGTGGAAAT GACGGCTGGA TTGCTTCCCG GTGCGGATCG CGATCTCGTT
GCCCCGCTGC ACAAGCGCCT CACTGGCATC TTCGAAGCCA TCATGCTCAA CACCACCGTC
ATCAGCATTG CCGACACTGG CAGTGCCGTG AAGGTGAAAT TCAAAACGCA GGACGGCAAA
GAAGAAGAGC AGACCTACGA TCGCGTCCTC GTCTCCGTCG GGCGCAAGCC GAACTCGCAG
ATCCCCGGCC TCGACAAGAC GCGCGTCAAG GTGAACCAGA AGGGCTTCCT CCAGGTGAAC
CCGTCGCTCA TGACCGACGA TCCATTCATC TACGCCATCG GCGACGTCGT CGGCGAACCG
ATGCTCGCGC ACAAGGCCTC ACACGAAGGT CTCGTCGCCG TCGAATCCAT CGCCGGCCAT
AAAGTCGCCT TCGAACCGCA AGCCATTCCG GCTGTCGTTT TCACCGACCC AGAAATTGCG
TGGGCCGGCC TCACCGAAAC TCAGGCTCAA AACGAAGGCC GCGAAGTCAC GGTCACGAAA
TTCCCCTGGG CTGCCAGCGG TCGAGCCGTC ACCATCGACC GCACCGAGGG CCTCACCAAG
CTCATCATCG ACCCGCAAAC TGAGCGCGTG TTAGGTGTCG GCATCTGTGG CCCGGGCGCT
GGTGAAATGA TCGCCGAAGG CGTGGTCGCC ATCGAGATGG GTGCCCTAGC AGGCGACATC
AAGCTCAGCA TCCATCCGCA TCCGACCTTG TCGGAGACGA TCATGGAAGC GGCGGAAGTC
TTCTACGGAC AATCCACCCA CATCTACCGT CCGAAGCGGA AATAG
 
Protein sequence
MADQKTPNIA VIGGGPGGYA AAFLAADLGM TVTLIDMELN PGGVCLYRGC IPSKALLHVA 
KLIEEAKHST NWGVTYDAPK IDLERLRTFK EGVVKKLTGG LGQLSKQRKV TYIQGKATLV
DSCTVKVEKT AGGEETLHFD KLILATGSRP AVIPAFNIGS PRVMDSTGAL NLEDIPKRLL
VVGGGYIGLE LGSVYAAIGS KVSVVEMTAG LLPGADRDLV APLHKRLTGI FEAIMLNTTV
ISIADTGSAV KVKFKTQDGK EEEQTYDRVL VSVGRKPNSQ IPGLDKTRVK VNQKGFLQVN
PSLMTDDPFI YAIGDVVGEP MLAHKASHEG LVAVESIAGH KVAFEPQAIP AVVFTDPEIA
WAGLTETQAQ NEGREVTVTK FPWAASGRAV TIDRTEGLTK LIIDPQTERV LGVGICGPGA
GEMIAEGVVA IEMGALAGDI KLSIHPHPTL SETIMEAAEV FYGQSTHIYR PKRK