Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2745 |
Symbol | |
ID | 4069436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 3251412 |
End bp | 3252125 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637984762 |
Product | peptidase M15D, vanX D-ala-D-ala dipeptidase |
Protein accession | YP_591820 |
Protein GI | 94969772 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2173] D-alanyl-D-alanine dipeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.791278 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCGTC GTGGGGTTCT CTTCCTCTTT CTCTGCGCGC CGCTCGTTGC GCAACAGCAA GTCCAACAGT TTCACATCAC GCCGGTTCGC CCAATCCCAG AGCTGCGCGC CGAAGCCCTC AAAGCGACGC CGCCAAAAGA ATCCGACGAC CTCCGCAAGC CCGACCTCGT GGAGTTGGTC AAGCTCGATC CCACCATCAA GCTCGACATC CATTACGCCT CGAGCAACAA CTTCCTCGGC ACGCCTCTCT ATGAAGAAGC CCGCGCATTC ATGGAGCGTC CCGCCGCCGA AGCCGTGGTG CGTGCGAACA AGAAACTCCA CGAACAAGGC TTAGGCCTGC TGATCTTCGA CTCCTATCGC CCCTGGTACG TGACTAAAAT CTTCTGGGAT GCGACCCCGC CCAAGGACCA CGACTTCGTC GCCAATCCCG CCGAGGGTTC GCGTCACAAT CGCGGCTGCG CCGTCGATCT TTCCCTCTAC GATCTCAAAA CGGGCAAGCC ACTCTCCATG CCCAGCGATT ACGACGAAAT GTCGAAGCGC GCGTATCCCG ACTACACCGG CGGCACCGCG GAAGAAAACG CCCATCGCGA TTTACTTCGC AAAACGATGG AAGCCGAAGG CTTTACGGTC TACCAGTACG AGTGGTGGCA CTTTGACTAC AAGGACTGGA AGCTCTATCC AATCGTGAAC CTGCGCTTTT CCGATATTCG CTAA
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Protein sequence | MFRRGVLFLF LCAPLVAQQQ VQQFHITPVR PIPELRAEAL KATPPKESDD LRKPDLVELV KLDPTIKLDI HYASSNNFLG TPLYEEARAF MERPAAEAVV RANKKLHEQG LGLLIFDSYR PWYVTKIFWD ATPPKDHDFV ANPAEGSRHN RGCAVDLSLY DLKTGKPLSM PSDYDEMSKR AYPDYTGGTA EENAHRDLLR KTMEAEGFTV YQYEWWHFDY KDWKLYPIVN LRFSDIR
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