Gene Acid345_2745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_2745 
Symbol 
ID4069436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3251412 
End bp3252125 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content58% 
IMG OID637984762 
Productpeptidase M15D, vanX D-ala-D-ala dipeptidase 
Protein accessionYP_591820 
Protein GI94969772 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2173] D-alanyl-D-alanine dipeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.791278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCGTC GTGGGGTTCT CTTCCTCTTT CTCTGCGCGC CGCTCGTTGC GCAACAGCAA 
GTCCAACAGT TTCACATCAC GCCGGTTCGC CCAATCCCAG AGCTGCGCGC CGAAGCCCTC
AAAGCGACGC CGCCAAAAGA ATCCGACGAC CTCCGCAAGC CCGACCTCGT GGAGTTGGTC
AAGCTCGATC CCACCATCAA GCTCGACATC CATTACGCCT CGAGCAACAA CTTCCTCGGC
ACGCCTCTCT ATGAAGAAGC CCGCGCATTC ATGGAGCGTC CCGCCGCCGA AGCCGTGGTG
CGTGCGAACA AGAAACTCCA CGAACAAGGC TTAGGCCTGC TGATCTTCGA CTCCTATCGC
CCCTGGTACG TGACTAAAAT CTTCTGGGAT GCGACCCCGC CCAAGGACCA CGACTTCGTC
GCCAATCCCG CCGAGGGTTC GCGTCACAAT CGCGGCTGCG CCGTCGATCT TTCCCTCTAC
GATCTCAAAA CGGGCAAGCC ACTCTCCATG CCCAGCGATT ACGACGAAAT GTCGAAGCGC
GCGTATCCCG ACTACACCGG CGGCACCGCG GAAGAAAACG CCCATCGCGA TTTACTTCGC
AAAACGATGG AAGCCGAAGG CTTTACGGTC TACCAGTACG AGTGGTGGCA CTTTGACTAC
AAGGACTGGA AGCTCTATCC AATCGTGAAC CTGCGCTTTT CCGATATTCG CTAA
 
Protein sequence
MFRRGVLFLF LCAPLVAQQQ VQQFHITPVR PIPELRAEAL KATPPKESDD LRKPDLVELV 
KLDPTIKLDI HYASSNNFLG TPLYEEARAF MERPAAEAVV RANKKLHEQG LGLLIFDSYR
PWYVTKIFWD ATPPKDHDFV ANPAEGSRHN RGCAVDLSLY DLKTGKPLSM PSDYDEMSKR
AYPDYTGGTA EENAHRDLLR KTMEAEGFTV YQYEWWHFDY KDWKLYPIVN LRFSDIR