Gene Acid345_2743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_2743 
Symbol 
ID4069434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3248384 
End bp3248734 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content58% 
IMG OID637984760 
Productanti-sigma-factor antagonist 
Protein accessionYP_591818 
Protein GI94969770 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.865383 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCGACA AAGCAGCAAC CAGCTCATTC ATCGTTGTAG TCAATCGTGA CGCAGCAGTG 
CCCGTCGTTC GTTGCACCGG GCGCCTGGTG CTCGGACTCA CCGATGAATT GCTCCTCCCC
GTGAAGCAAT TGATCTCAGC ATCAAAGCGC ATCGTCCTCG ATTTCACCGA ACTCACCCGC
ATGGACAGCT CCGGCCTCGG TACCATCGTG CGGCTCCTCG TTACAGCGAA GGCCGCAGGC
TGTTCGCTGG AGTTGAAGAA CGTAGGCCCG CCCATCCGCC AACTGCTCGG CATCACCAAC
CTGCTCGATG CGTTCACCAT CATCGGGGAA AACAACATCA AGCTCGGCTA G
 
Protein sequence
MADKAATSSF IVVVNRDAAV PVVRCTGRLV LGLTDELLLP VKQLISASKR IVLDFTELTR 
MDSSGLGTIV RLLVTAKAAG CSLELKNVGP PIRQLLGITN LLDAFTIIGE NNIKLG