| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2737 |
|---|
| Symbol | |
|---|
| ID | 4069428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 3238277 |
|---|
| End bp | 3238909 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637984754 |
|---|
| Product | Ham1-like protein |
|---|
| Protein accession | YP_591812 |
|---|
| Protein GI | 94969764 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.303046 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCGCA TTCTTGTAGC CACTTCCAAT CCAGGAAAGA TCCGTGATTT CATCGGCGCC
GCCCGCGTGC ATGGCGTGGA ACTCGACGTC CTGCCCGAGT ACAAACAGAT TGAGCCGCCG
GAGGAAACTG GCGAGACCTT TGAAGCCAAT GCACGGCTGA AGGCGGAATA CTACAGTCAT
CATGTGCCGG CGCAACTGGT GCTTGCCGAT GATTCCGGCC TCGAAGTGGA CGCGCTGAAC
CGCGCGCCAG GCGTGCGTTC CGCGCGGTAT GCCACCGATG AAATCGGCTA CGCCGGGCCG
GACATCGACG ATCGTAACAA CGCATTAGTG CTGGAGCGGA TGAAAGATGT CCACGGCCCG
CAGCGTACGG GACGGTTTGT TTGTGTCCTG GCGCTGGCAC GCGATGGACT GACGATCGCG
ACCTTTCATG GCAAAGCCGA AGGACGGATT CTGCGCGAGC TGCGCGGATC AAACGGCTTC
GGTTACGACC CGATGTTTTT CTTTCCGGAG ATTGGAAAGA CCTTCGCAGA GTTGAGCGCC
GAGGAGAAAT CGCACTACAG CCATCGCGGC GCCGCCTTCC GCAAGCTGCT CGATTGGGCG
GATCAAAACC AAAACCAAAA TCAAAATCTT TAA
|
|---|
| Protein sequence | MRRILVATSN PGKIRDFIGA ARVHGVELDV LPEYKQIEPP EETGETFEAN ARLKAEYYSH
HVPAQLVLAD DSGLEVDALN RAPGVRSARY ATDEIGYAGP DIDDRNNALV LERMKDVHGP
QRTGRFVCVL ALARDGLTIA TFHGKAEGRI LRELRGSNGF GYDPMFFFPE IGKTFAELSA
EEKSHYSHRG AAFRKLLDWA DQNQNQNQNL
|
|---|
| |