| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2708 |
|---|
| Symbol | |
|---|
| ID | 4071610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 3199556 |
|---|
| End bp | 3201256 |
|---|
| Gene Length | 1701 bp |
|---|
| Protein Length | 566 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637984725 |
|---|
| Product | type I phosphodiesterase/nucleotide pyrophosphatase |
|---|
| Protein accession | YP_591783 |
|---|
| Protein GI | 94969735 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTCACAC GAATCAAAGC TGCAGCAATC GGTCTGTCTC TCGCGGCCGC GCTCGCGCCG
CACTCTTTTG CACAGAACCA TCTCAACGAA CGCGAACACA TTCGCCGCGT TCTCTTGATC
AGCATCGACG GCATGCACGC CGTAGATTTC GAGAATTGCG TTGCAGGAGG CTATTGTCCG
AGCCTCGCCG CACTTGGCAA GACTGGTATC AACTACACGC GCACCTCGAC CTCGCGACCT
TCGGATTCCT TCCCTGGGTT AATGGCCCTT GTCAGCGGCG GCAGTCCGAA GACAGTTGGC
GCTTACTATG ACGTTGCGTA CGATCGCGTT CTTGCTCCTC CTTCACTGGA TACCGGCAAC
GGCGTCTTCG CAGGCACCTG CACCCCGAAC GTTGCGAATG GCACGACCAC CGAGTACGAA
GAGGGCGTCG ATGTTGACCA GACCAAACTC AACGGCGGCG GCCCATATAG CTTGATGGAT
GGCGGTATCT ATTCGATCAA ACTTGAACGT CTTCCACGCG ATCCGTACCA CGGCTGCTCG
CCGGTGCTGC CTTGGAATTT CGTTCGTACC AACACGATCT TCGGCGTGAT CCACGCGTCG
GGTGGATACA CCGCGTGGTC AGACAAGCAT CCGGTTTACG CTTCGGTTTC CGGACCGAGC
AAAAATGCCG ACAACGTTGA CGATTACTAC TCGCCGGAAA TCAACTCGGG CGTCATCGCG
CTTCCCGGCA TCACGACACC GACGGGCAAG TCGTGCTCCA CGATTCGTGA CACCTTCCAG
ACCGGCGCAT GGACTGACAG CTTTCTGAAC GTTCAGTGCT ACGACACACT GAAGGTCAAC
GCCATCGTGA ACGAAATCGA CGGCAAGACG CATAACGGAC TTCGCAAAGC CCCGGTACCG
AACATCTTCG GTATGAATTT CCAGGCTGTG AGTGTCGGCC AGAAATTGAT TGAGAAGCAG
GGCTCTGCGA AGATCATTGG CGGATACACG GATGCCGCCG CGACAACGAC CGAGGCGCTG
AAGGACGGGA TTCTCTTTGT GGACGCTTCC GTGGGGAAGA TGGTAAGTGA GCTTAAGAGT
CGCGGCCTGT ACGACAGCAC ACTGATCATC ATCACTGCCA AGCACGGTCA GTCGCCCATT
GATCCGAACC GCTTCAAGGA ACTTGGCAAG GGAATCACCA ACACGCCGGC GAACGTCATC
GCCAGCTACT TGCCTCCGGT TCCCGCCCCT GAGAACCCGA ACACGCCGGG TGGTATCGGG
CCGACTGAGG ATGACATCTC GCTGCTCTGG CTCGCCGATT CCAGCAACAC TCAGAGTGCA
GTGGATTTGA TCGAAGCCAA CGGAGACGCC GTCGGTGCTG GCCAGATCTT CTACGGGCCT
TCACTGACCA CGATGTTCAA CTCCCCAGCG ACTGATTCGC GCACGCCTGA CATCATCGTG
CAGCCCTACT CGGGTGTGAT CTATACCGGG AGTTCGAAGA AACAGGAGGA GCATGGCGGC
TTCGCGCAGG ACGATACCAA CGTGATGCTG CTGGTCTCGA ACCCAAGCTT CAGGCCGGTC
ACGCTCACTA CGTTTGTCGA AACGATGCAG GTTGCGCCGA CAATCTTGAA GGCTCTCGGC
CTTGATCCTG ATCGTCTCGA TGCGGTGCGC AAGGAGGGAA CCGCCGTCCT TCCAGGATTA
CCACTGCGCG ACGACAGATA G
|
|---|
| Protein sequence | MFTRIKAAAI GLSLAAALAP HSFAQNHLNE REHIRRVLLI SIDGMHAVDF ENCVAGGYCP
SLAALGKTGI NYTRTSTSRP SDSFPGLMAL VSGGSPKTVG AYYDVAYDRV LAPPSLDTGN
GVFAGTCTPN VANGTTTEYE EGVDVDQTKL NGGGPYSLMD GGIYSIKLER LPRDPYHGCS
PVLPWNFVRT NTIFGVIHAS GGYTAWSDKH PVYASVSGPS KNADNVDDYY SPEINSGVIA
LPGITTPTGK SCSTIRDTFQ TGAWTDSFLN VQCYDTLKVN AIVNEIDGKT HNGLRKAPVP
NIFGMNFQAV SVGQKLIEKQ GSAKIIGGYT DAAATTTEAL KDGILFVDAS VGKMVSELKS
RGLYDSTLII ITAKHGQSPI DPNRFKELGK GITNTPANVI ASYLPPVPAP ENPNTPGGIG
PTEDDISLLW LADSSNTQSA VDLIEANGDA VGAGQIFYGP SLTTMFNSPA TDSRTPDIIV
QPYSGVIYTG SSKKQEEHGG FAQDDTNVML LVSNPSFRPV TLTTFVETMQ VAPTILKALG
LDPDRLDAVR KEGTAVLPGL PLRDDR
|
|---|
| |