| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2669 |
|---|
| Symbol | |
|---|
| ID | 4071923 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 3143714 |
|---|
| End bp | 3144379 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637984686 |
|---|
| Product | monofunctional biosynthetic peptidoglycan transglycosylase |
|---|
| Protein accession | YP_591744 |
|---|
| Protein GI | 94969696 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
|---|
| TIGRFAM ID | [TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTTT TGAAGTTCGC GCTGCGATGG GTTTTGGTGG GGCTTGTCGC GTTGTGGCTG
GGAGCGGCTT TGACGCTGGT GCTGCTGCGC TGGGTGGATC CACCAACTAC TGCGGTGCAG
ACGCAGCGTC GGATGCAGTC GTGGACATCG AGTAAGCCGT ATCGCAAACA ATATAAGTTT
GTGCCGCTGG CGCAGATTTC TCCTCATCTG CAACATGCCG TGATCTCGGC GGAGGATGCT
CGCTTCTATC AGCATCATGG GTTCGATTGG CACCAGATCC AACTGGCTTA CGAAAACGAT
ATGGACGGTG GGAAAATTCG CGGGGCGTCG ACCCTGACGG AGCAGCTGGT AAAGAATTTG
TTCTTCGGGA CGGAGCGGTC GTTCGTGCGC AAGGGAGCCG AAGTGACGCT GGTTCCGGTG
GCGGAGTTCG TGTTGGGAAA GCAGCGGATC CTGGAGCTGT ATCTCAACGT GGTGGAGTGG
GGACCGGGAG TGTATGGGGC GGATGCGGCG TGCCATACCT GGTACAAAAC CTCCGCGCAC
AACATTGGGA AAGATCAGGC AGCGCGATTG GCGGCGATTT TGCCGGCGCC GCGGCGTAGG
AAGCCGGAGC GGATGAATGA TTACAGCGAT TTGATATTGG AGAGGATGAA GCAGGTGGGG
TGGTAG
|
|---|
| Protein sequence | MSFLKFALRW VLVGLVALWL GAALTLVLLR WVDPPTTAVQ TQRRMQSWTS SKPYRKQYKF
VPLAQISPHL QHAVISAEDA RFYQHHGFDW HQIQLAYEND MDGGKIRGAS TLTEQLVKNL
FFGTERSFVR KGAEVTLVPV AEFVLGKQRI LELYLNVVEW GPGVYGADAA CHTWYKTSAH
NIGKDQAARL AAILPAPRRR KPERMNDYSD LILERMKQVG W
|
|---|
| |