Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2658 |
Symbol | |
ID | 4071912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 3131906 |
End bp | 3133567 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637984675 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_591733 |
Protein GI | 94969685 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGGGAC CACAGTTTCG AAACTCTGAA ACCGTTGACT TCATCGTGGT AGGCGCGGGA GCGGCCGGCG GTGTTATGGC GAAGGAGCTG GCCGTCGCGG GCTTCAGCCT GGTGGTGCTG GAGCAGGGGC CGTATCTGAG CGAGGAGGAC TTCGGACACG ACGAGATCAA GTTCGCCATC CAGAAGAAAC TGACCAACGA TACGAAGATC CAGCCCATCA CCTATCGCAA GACCGAAGCC GAGGTTGCGA AGCCGTTCAA GGCCATTGAA TACGGGCGGC AGGTGGGCGG CGGGTCGGTA CACTTCACGG CGAATTACTG GCGTCTGCAT GAGAGCGATT TCCACGAGCG CAGTCTTTGG GGCGAGGTGC AAGGCTCGAC GTTCGACGAC TGGCCGATTC GCTACGGCGA CCTGGAACCC TATTACACCA AGGCGGAAGA GGAGCTGGGC ATCTCGGGCC TGGGTGGGGC GAACCCGTTC GAGGCGCCGC GGTCGAAGCC GTATCCGCTG CCGCCGATGC CGGTCAAGTC CTCGGGTGTG CTGTTCGAGC GGGCGACGAA GAAGATGGGG CTGCATCCGT ATCCTGCGCC GGTGGCGGTA CTCTCGCAGC CGTATCGCGG AAGCGGCGCG TGCGTGCACT GCGGCATGTG TGAACTCTTT GGCTGCGAGA TGAAAGCGAA GTCGAGCACG CTGGTCAGCG TCATTCCGAT TGCGGAGAAG AGCGGACGCT GCGAGATCCG CCCCAATTCC TACGTGCGCA AGTTGGAAAC CGACGCCTCC GGCCGCGTAA CCGGGGTGAT CTATTTCGAC GCGCAGAAGC AAGAGGTGCT GCAGCGCGCC AAGGCGGTGG TGCTTTGCGC CAACGGTGTG GAGTCGGCGA AGCTGCTGCT GATGTCGAAG TCGAACCGGT TCCCGCAGGG GCTCGCGAAT TCAAGCGGGC TGGTGGGCAA GAACCTGATG TGGGACAACG GCACGGAATC GAGCGGGCTG TTTGAACACC CGCTGAACGA ATTCAAGAGC GTGCAGGTCA CGCGCGTGAT TCACGATTAC TACGATGCCG ATCGAAAGCG AGGCTTTTAC GGCGGCGGAG GCATCGACGC GCGCTTCGAT TTCTATCCCA TCACCTTCGC GCTTACCGGG CTGCCGGACG ATGCTCCGAC CTGGGGACTG GAATTCAAGA AAACGGTTGG CAAGTACTTC ACGCGTACCA TGACTCTGCT CGCGCATGCC ACTTCGCTGC CGCGCGAAAC GAACAGTGTC TCGCTCGACC CGCAGATGAA AGATGCATGG GGATTGCCGG CGGTGCGCAT CACCTTCGAC TGGCATCCGG ATGATATCGC GAACATGAAG TGGCTCGTCG AAAGGGAACG CGAGATTTTG CAGGTAGCGG GAGCACAGAA AGTATGGTCG TTCCCGGTGG AACCGGCGCA GCCGAACCTG ATGCCGTCTC GGCACCTGAT TGGAACTTGC CGCATGGGAC GCGACCCGAA AAAATCAGTC GTGGATCCCT TCGGCCACGC CCACGATGTG CCGAACCTGT TCATCGTGGA CGGAAGCAAC TTCGTGACCT CAGGACGACA GCAACCAACG GCGACGATCC AGGCGCTGGC TTATCGGGCG GCAGAACGGA TTGCGGGGAA GGCTAAGGCG GGGGAGTTGT AG
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Protein sequence | MKGPQFRNSE TVDFIVVGAG AAGGVMAKEL AVAGFSLVVL EQGPYLSEED FGHDEIKFAI QKKLTNDTKI QPITYRKTEA EVAKPFKAIE YGRQVGGGSV HFTANYWRLH ESDFHERSLW GEVQGSTFDD WPIRYGDLEP YYTKAEEELG ISGLGGANPF EAPRSKPYPL PPMPVKSSGV LFERATKKMG LHPYPAPVAV LSQPYRGSGA CVHCGMCELF GCEMKAKSST LVSVIPIAEK SGRCEIRPNS YVRKLETDAS GRVTGVIYFD AQKQEVLQRA KAVVLCANGV ESAKLLLMSK SNRFPQGLAN SSGLVGKNLM WDNGTESSGL FEHPLNEFKS VQVTRVIHDY YDADRKRGFY GGGGIDARFD FYPITFALTG LPDDAPTWGL EFKKTVGKYF TRTMTLLAHA TSLPRETNSV SLDPQMKDAW GLPAVRITFD WHPDDIANMK WLVEREREIL QVAGAQKVWS FPVEPAQPNL MPSRHLIGTC RMGRDPKKSV VDPFGHAHDV PNLFIVDGSN FVTSGRQQPT ATIQALAYRA AERIAGKAKA GEL
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