| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2649 |
|---|
| Symbol | |
|---|
| ID | 4071903 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 3123888 |
|---|
| End bp | 3124604 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637984666 |
|---|
| Product | haloacid dehalogenase-like hydrolase |
|---|
| Protein accession | YP_591724 |
|---|
| Protein GI | 94969676 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0560] Phosphoserine phosphatase |
|---|
| TIGRFAM ID | [TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGTACTC CGATCTCCGA ACAGCTCTCT GAACGCGCCG AAAAGTTTGT CTCTTCGGTG
CTCGCCCTCG ACCTCAAGCT CGCCGTCTTC GATTGCGACG GCACTCTCTG GCAGCACGAC
AGCGGTTCGC TCTTCTTCGC CTGGGAGCAG AAGCGGGGCC TCGTCCCGCA GGAAGCGCTC
GACTGGATCC TCCCCCGCTA CGCCGCCTAC AAAGAAACCA GCGCTATCGC CGAAGAAGTC
ATGTGCGGCG ACATGGTCAC CATCCACCAC GGCCTCGACG AAGAACTACT GCGCCGCGAA
GCGGAGACGT TCTGGCACGA GCAGATCCAT GGCTGCATCT TTCCGGAGAT GTTCAAGCTC
ACCCACGCGC TTAAAGATCG CGGTGTAGAT CTCTGGGCCG TCTCTTCAAC CAACAACTGG
GTGGTCGAAG TCGGCGCCGA ATACTACGGC ATCCCGCGTG AGCACGTGCT CGCCGCCGAA
GTGCACGTGG AAAACGGCAA GGCCACCGAT CGCCTCGTCC GTGTCCCCTC CGGCCCCGAC
AAGAAGGTCG CCATCAACGA GGTCATCAAG CGCCGCCCCG ACGCCGTCTT TGGCAACTCG
GTCCACGATC TGCACATGCT TGAGATCGCG CGCCATCCGT TCGTCATCCA TCCCAATCCG
GACCTTCGTG CCATCGCCGA AGAGCGCCAG TGGCCGATTT ACGAGCCCTT GGGGTAA
|
|---|
| Protein sequence | MSTPISEQLS ERAEKFVSSV LALDLKLAVF DCDGTLWQHD SGSLFFAWEQ KRGLVPQEAL
DWILPRYAAY KETSAIAEEV MCGDMVTIHH GLDEELLRRE AETFWHEQIH GCIFPEMFKL
THALKDRGVD LWAVSSTNNW VVEVGAEYYG IPREHVLAAE VHVENGKATD RLVRVPSGPD
KKVAINEVIK RRPDAVFGNS VHDLHMLEIA RHPFVIHPNP DLRAIAEERQ WPIYEPLG
|
|---|
| |