Gene Acid345_2623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_2623 
Symbol 
ID4072032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3093963 
End bp3094691 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content57% 
IMG OID637984640 
ProductMgtC/SapB transporter 
Protein accessionYP_591698 
Protein GI94969650 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.55252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTGTT GCAATTCCAT GAATTTACCG AATTGGGCAG GCACTTACAG CTTTCATTTT 
GAACCGCTCT GGATCCTTGG CTCGAACCTG TTTCGCGTTG GATTAGCGGC GGTCCTTGGC
GGCTGTATTG GCCTTGAGCG CGAACTGAAG CACAAGCCAG CGGGACTGCG CACCAACATG
TTCATTTGCC TCGGCGCCGC GATGTTCACG GTGCTTTCCG CGGAACTGGC CGGCGAATTC
ACCGGCGATC ACACCCGTGT GGCGGCGCAG ATCATTCCCG GTATCGGCTT CATTGGCGCG
GGATCTATTC TCCATTCGCG TGGTTCGGTG CAGGGAATCA CCACGGCTGC GACGTTGTTT
GTAGTGGCGT CAGTGGGCAT GGCTGCAGGC GGCGGTATGT ATCTGACCGC CGTACTCTCC
ACGATCCTCA TCTTGCTCTC GTTGATCGGT CTCGGCTTCG TCGAGACAAA GTTCAACCTT
AAGCCCATTC CGACGCTCTA CGAGGTCTAC GGCGAGAACG CCGACGAACT CACGAATCAC
ATCAACGAAC TCCTGGAAGA CATGCACCAT GTGATGGAGA GCGTTCAGGT GAGCAAGTCG
AACGGTCATT ACCGGATGCA ATTTGTGGTC ACCAGCACGC TGGGCGAACG CCAGCGCCTT
CTCTCCAGCT TGCAGGCGGT GAGCTGCATT ACCCGCGTGA ATACCTTCTC CGCACCCGAA
CGGGAGTAA
 
Protein sequence
MICCNSMNLP NWAGTYSFHF EPLWILGSNL FRVGLAAVLG GCIGLERELK HKPAGLRTNM 
FICLGAAMFT VLSAELAGEF TGDHTRVAAQ IIPGIGFIGA GSILHSRGSV QGITTAATLF
VVASVGMAAG GGMYLTAVLS TILILLSLIG LGFVETKFNL KPIPTLYEVY GENADELTNH
INELLEDMHH VMESVQVSKS NGHYRMQFVV TSTLGERQRL LSSLQAVSCI TRVNTFSAPE
RE