| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2622 |
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| Symbol | |
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| ID | 4072031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 3093177 |
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| End bp | 3093959 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637984639 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_591697 |
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| Protein GI | 94969649 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.562727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGTCGA TTCCGTTTGC CAAGGCGAGC GCCTGCGGCA ACGATTTCCT TGTCATTGAT
TTTGCGCATG CAGGTGACAA TCCCTCCGAA CTTTCGCGGC GGCTTTGCGA TCGCCATAAC
GGCGTTGGCG CAGACGGCGT GGAGTGGATC CTGCCGACAT CGGAAGCCGA CATCGAAGCG
CGCCTTATTA ACGCCGATGG CAGCGAAGCC GAGGTCTCAG GAAACGGCAC ACGGTGCGTG
GCTGCCTGCA TCTCCGACCA CACCGGCGCA ACGAAGATTC GCATTCTGAC CGGCGCAGGA
GTGAAGGCCT GCGAACTGAC CGTACACAAC GGCACGTCGT TTGAGTTCAA AGCCGCGATG
GGGAAGCCCG AGATTGCTGG CGAACTAACA GTGAAGACCC GGCACCATGA AACGACTGGA
ATCCAGCTCT CCACCGGCAA TCCGCACTTC GTCATCTTCG TCGAAGAGTT CGAGGAAGGC
TGGCAAGTTC TCGCCGATTC GGTCGCGCGA ACGCCGCATT TTCCCTTGGG AACGAACATT
GAATTCGTAA AGGTACTCGA TCGACATTCG CTGGATGTCC GGCTCTACGA GCGCGGTGTA
GGCGAGACGC AATCCTCCGG CACCGGTTCT TGTGCGTCGG CCGTCGCCGC GATTCACTCC
GGTAAATGCG AGTCTCCGGT GCGCGTCGCC ACGCCGGGCG GTGCGCAAAC CGTGGAGTGG
AGCGGTGAAA TTACGCTCAC TGGGCCTGCG ACGATCGTCT GCACTGGCGA GTTTTTCATT
TAA
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| Protein sequence | MPSIPFAKAS ACGNDFLVID FAHAGDNPSE LSRRLCDRHN GVGADGVEWI LPTSEADIEA
RLINADGSEA EVSGNGTRCV AACISDHTGA TKIRILTGAG VKACELTVHN GTSFEFKAAM
GKPEIAGELT VKTRHHETTG IQLSTGNPHF VIFVEEFEEG WQVLADSVAR TPHFPLGTNI
EFVKVLDRHS LDVRLYERGV GETQSSGTGS CASAVAAIHS GKCESPVRVA TPGGAQTVEW
SGEITLTGPA TIVCTGEFFI
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