| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2607 |
|---|
| Symbol | |
|---|
| ID | 4072016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 3074974 |
|---|
| End bp | 3075846 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637984624 |
|---|
| Product | DNA end-binding protein Ku |
|---|
| Protein accession | YP_591682 |
|---|
| Protein GI | 94969634 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1273] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02772] Ku protein, prokaryotic |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCTT CGGTTTGGTC GGGCTATCTA ACTTTCGGAT TGATTTCAAT GCCGGTGCGG
CTGTTTTCAG GCGCGCGCGG ATCGCGAATT TCTTTCAACC AGTTGCATCG TGAGGACCAC
GCTCGGGTGA AGCAGCAGCT GGTGTGCTCG GCTGACGGCA AGGTGCTGGA GCGCGACGAG
ATCGTAAAGG GATATGAGTA CCGCAAAGGC GAGTACGTGA TCATCGATCC CGAAGAGTTG
AAGAAGATCG AGCCCAAGAC GGCGAAGTCG ATGGAGATCC TCGAGTTTGT AAAGGCCGAA
GAGGTCGATC CGGTGTATTT CGAGACCTCT TACTACTTGC AACCGGATGA AGGCGGCGAG
AAGCCGTACG CGCTGCTGGT GCAGGCGCTG AAGGAATCCG ATTACATGGG CATCGCGAAG
GTGACGATGC ATAACCGCGA GTACACGGTG TTCCTGCGTC CGCACACCAG CGGAATCATG
CTGCACACCA TGTACTACGA AGACGAAGTG CGCAAGATGG AAGCGCCGAA AATCACCAGC
GAGGTGAAGC CGGCAGAAGT GAAGATCGCG CACCAACTGA TCGAGGCACT GGCAGGCAAG
TTCGAGCCGG AGAAGTTCCA CGACGTTTAC GAAGCAAACG TGAAGAAATT GATCGAGGCG
CATCTGGAAG GGCAGGACGT GGAGGCAGTG GCGAAACCTG CGAAGCCCGC GAAGGTGGTT
GATTTGATGG ACGCCCTGAA GCAGAGCCTG GCGGCGATGA AAGACCAGAA GAAGGGTTCG
CGCCTGGCTG AGGTGGACAA GGAATCCACC GTGCAGATGA CGCCGAAGAA GCCGGCGGTG
AAGGAGCGGA GAGGGAGAAA GCGGGTCGCA TAG
|
|---|
| Protein sequence | MAASVWSGYL TFGLISMPVR LFSGARGSRI SFNQLHREDH ARVKQQLVCS ADGKVLERDE
IVKGYEYRKG EYVIIDPEEL KKIEPKTAKS MEILEFVKAE EVDPVYFETS YYLQPDEGGE
KPYALLVQAL KESDYMGIAK VTMHNREYTV FLRPHTSGIM LHTMYYEDEV RKMEAPKITS
EVKPAEVKIA HQLIEALAGK FEPEKFHDVY EANVKKLIEA HLEGQDVEAV AKPAKPAKVV
DLMDALKQSL AAMKDQKKGS RLAEVDKEST VQMTPKKPAV KERRGRKRVA
|
|---|
| |