Gene Acid345_2600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_2600 
Symbol 
ID4070563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3066999 
End bp3067940 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content57% 
IMG OID637984617 
Product6-phosphogluconate dehydrogenase, NAD-binding 
Protein accessionYP_591675 
Protein GI94969627 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGAA TGTCCATTTC GAACCTTTTG GGAGGCTGGT TTCATCCATT CCGCAGGAGG 
GGACACTTGA AAGTAGGATT CCTTGGATTG GGCAACATGG GCGAGCCGAT GGCTGCCAAC
CTCATCGCTG CAGGTCATCA GGTCACGGTG TGGAACCGGA CCGCCGCTAA AGCAGAGCCG
CTAAAGGAAC GAGGGGTGAA GGTCGCCACT GAAATTAAAG ACGCGGTTCA GAATCAGGAC
GTGGTGTGCA CGATGGTGGC CGACGACCAT GCGCTTCGAA CCATCCTTGA AGGTGGACTT
CTCGAAGCGC TGCCGAAGGG TGCTGTCCAT GTCTCCCATA GCACCGTAAG TGTCGCGATG
GCTGAGGAAC TGAAGCGCGA GCATGGCAAG CGTGGGCAGG CATTTATCTC GGCGCCGGTA
TTTGGACGCC CCGAAGCCGC ACAGGCGAAG AAGTTGTTCG TTGTTGTCTC GGGAGACCCG
GCGGTCATAG AAAAGGTAAA GCCGGTGCTG GATGCTATCG GGCAGGGAGT AACTGTGATC
GGCAATGATC CGGTACAGGC CAACGTAGCG AAGATCAGCG GAAACTTTCT GATTGCTGCG
GCGATGGAGG CGATGGGCGA AGCCGTGGCG CTCGTCGGAC GGTACGGCGT CGATCCGGTG
CAGTATATGG AGTTCCTTAC CAGCACGTTG TTCGCGGCGC CGGTTTACAA GAATTACGGA
ATGAAGATCG CGAAACAGGA ATACGTGCCG GTGGGGTTCA AGGCGCCACT CGGTTTGAAA
GATGCGAAGC TCATGATCGC TGCGGGTGAA GGGAAGTATG TTCCGCTGCC GTTAGCGAGC
CTGATTCACG ACCAGATGAT CACTGCGATT GCGCACTTCG GTGAAGACGT GGATTGGTCG
GTGATTGCGA AGGTCTCAGC GGAGCATGCC GGCTTGAAGT AA
 
Protein sequence
MQRMSISNLL GGWFHPFRRR GHLKVGFLGL GNMGEPMAAN LIAAGHQVTV WNRTAAKAEP 
LKERGVKVAT EIKDAVQNQD VVCTMVADDH ALRTILEGGL LEALPKGAVH VSHSTVSVAM
AEELKREHGK RGQAFISAPV FGRPEAAQAK KLFVVVSGDP AVIEKVKPVL DAIGQGVTVI
GNDPVQANVA KISGNFLIAA AMEAMGEAVA LVGRYGVDPV QYMEFLTSTL FAAPVYKNYG
MKIAKQEYVP VGFKAPLGLK DAKLMIAAGE GKYVPLPLAS LIHDQMITAI AHFGEDVDWS
VIAKVSAEHA GLK