Gene Acid345_2593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_2593 
Symbol 
ID4070556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3062219 
End bp3062719 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content63% 
IMG OID637984610 
Productrare lipoprotein A 
Protein accessionYP_591668 
Protein GI94969620 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.891934 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGAG TACTGACTCA GATGGTGGCG ACGATTGCCG TCCTGACCAC CATGGGAGCG 
GCACACGGGC CGAACACGAT GGAGAACCAC TCCCAGGCCG CCGTCCAGAA CCAGCCGGTT
CTGACGGCCA GCGTCAACCC GCAGCCCTCC TCAACCCCTA AGAAGAAGAC CAAGCCCTTC
CAGGTCGGCC CTGCCTCCTG GTACGGGAAG CTCTTCCACG GCAAGCAGAC CGCCTCGGGC
GAGACCTACA ACATGTACGA AATGACCGCC GCTCATCCCG ATCTGCCCCT TGGCACCCGG
GTGAAGGTCA CGAACCTGAG GAACGACAAG GCCGTCATCG TGCGCGTCAA CGACCGCGGA
CCACTGGTTC CCGGCCGGAT CATCGACCTC TCCTACGGCG CCGCCCAAGT GCTGGGCTTC
AGTGACAAGG GCGTCCAGAA GGTCCGTTTA GATATCGTTC CCTCCGACAA AACCGACGAG
AGCGCCCGCG TCCGCCAGTA A
 
Protein sequence
MQRVLTQMVA TIAVLTTMGA AHGPNTMENH SQAAVQNQPV LTASVNPQPS STPKKKTKPF 
QVGPASWYGK LFHGKQTASG ETYNMYEMTA AHPDLPLGTR VKVTNLRNDK AVIVRVNDRG
PLVPGRIIDL SYGAAQVLGF SDKGVQKVRL DIVPSDKTDE SARVRQ