| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2592 |
|---|
| Symbol | |
|---|
| ID | 4070555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 3061067 |
|---|
| End bp | 3061831 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637984609 |
|---|
| Product | phosphomethylpyrimidine kinase |
|---|
| Protein accession | YP_591667 |
|---|
| Protein GI | 94969619 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
|---|
| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATTG TGCTGTCGAT TGCGGGGTAC GATCCGTCCT CAGGCGCGGG CATCACTGCG
GACGTCAAAA CGGCTGCGGC ACACGAATGT TATGCGATCA CCTGTATTAC GGCAGTTACC
GTCCAGACAA CGGAAAAGGT GTTTGCGGTC GAGCCGCTGC GGGCGGAGAT CGTTCGCGAC
ACCTTATATG AGCTGGTACG GGACATGCCG CCGGCGGCAG TTCGGATCGG CATGTTAGGG
AGCGGAGAGG TGGCCGAGGT GGTAGCGGAC TTTCTGGAAA CCACCCGGTT GAGGAATGTG
GTGCTCGACC CGGTGCTGAG GTCGACATCG GGAGCGGCCC TGATCGATGA ACGGGGGGAA
CAGGTGATCC GGGCGCGGCT GCTCAAGGCG GTGGACGTCT GTACGCCGAA CGAGGCTGAG
GCGCGGGTGC TGGCGGAGTG CGAGGCGAGC CCTGAAGGGC TGGCGAGGGA GCTTCACCGG
AAGGGGTGTC CGGCGGTGGT GATCACCGGC GGCGAACGGG AGGATTCGGG CGACCTGTTG
AGTTTCGGAG ACCAGCAGGA GTGGCTACGC GCGGAGAAGA TCCGCAGCCG GGCGACTCAC
GGCACCGGGT GCGCGTTTGC GACCGCGATT GCCTGCAACC TGGCGTTGGG GCGCCAGCTG
CGAGAAGCGG TCGTCGAGGC GAAATTCTAC GTGCGTCGGG CGATCACCCT TGGGTCAGAC
GAGCCGCTGG GGCATGGGCG TGGTCCGATG AACCACTTCG TCTAG
|
|---|
| Protein sequence | MPIVLSIAGY DPSSGAGITA DVKTAAAHEC YAITCITAVT VQTTEKVFAV EPLRAEIVRD
TLYELVRDMP PAAVRIGMLG SGEVAEVVAD FLETTRLRNV VLDPVLRSTS GAALIDERGE
QVIRARLLKA VDVCTPNEAE ARVLAECEAS PEGLARELHR KGCPAVVITG GEREDSGDLL
SFGDQQEWLR AEKIRSRATH GTGCAFATAI ACNLALGRQL REAVVEAKFY VRRAITLGSD
EPLGHGRGPM NHFV
|
|---|
| |