Gene Acid345_2584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_2584 
Symbol 
ID4070547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp3053089 
End bp3053955 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content59% 
IMG OID637984601 
Productpolysaccharide export protein 
Protein accessionYP_591659 
Protein GI94969611 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1596] Periplasmic protein involved in polysaccharide export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCC TAGCTGCGAT TCTCCTGCTT CTAAGCGCGA CCTTCCTGCG CTCTCAATCC 
GACGCCAACC TGACGATCGG CCCCGGCGAC CTCATCTCTA TTGATGTCTT CGATGTTTCC
GAACTCAAAC AGGAGTTACG GGTCAACGAA TCCGGAGACG CCGAACTCGC CTTAGTCGGA
GCGCTCCACG TCGCGAGTCT CACTCCAGAC GCCGCCTCCA CGCAGATCGC GTCTGCGCTC
GAATCCCGGA GACTGGTCGT AAAACCTCAA GTCCGGGTCC TCATCCGCGA GTACGCGACT
CAGGGCGCTA CGGTCTCCGG CGAAGTTCGC AAGCCAGGTA TTTACCAGAT CTACGCCCCG
CGCCTTCTCT CGCAACTTAT TTCTGAAGCC GGCGGCCTTA CCGAACTCGC TTCGCCAACC
GTCCGAATTA AGCGGCGCAA CGGCACCGAC GAATCCGTTC GTCTCCCGCG CAACGATAGC
TCCTCGCTGA TCATGGTCTA CCCAGGTGAC ACCATCCTCG TGCAACGAGC AGGCATTACC
TATCTTGTAG GCGATGTCTC GCGCTCCGGC GGATTCGTGA TGCAAAACGA TGGCGAGCTT
TCCGTCGCAC AACTAGTCGC GCTTGGTGGC GGACTCGCAC CCACTGCAAA AGCCGGGCAC
GCAAAGCTCG TCCGCAAGAC TCTATCCGGC CGCGAGGAAA TCGAAGTCAA TGTCGCCGAA
ATCCTCCGGG GTCGTGCCCC CGACGTCGCC CTCCACAACG AGGACATCCT CTTCATTCCA
AATAGCGCAT GGAAGACGGC AGCCACGCGG CTTCAGAACA TCACGCAGCT GACCCTCGGG
GCAGCCATCT ACAGCAGTCT CAACTAG
 
Protein sequence
MKTLAAILLL LSATFLRSQS DANLTIGPGD LISIDVFDVS ELKQELRVNE SGDAELALVG 
ALHVASLTPD AASTQIASAL ESRRLVVKPQ VRVLIREYAT QGATVSGEVR KPGIYQIYAP
RLLSQLISEA GGLTELASPT VRIKRRNGTD ESVRLPRNDS SSLIMVYPGD TILVQRAGIT
YLVGDVSRSG GFVMQNDGEL SVAQLVALGG GLAPTAKAGH AKLVRKTLSG REEIEVNVAE
ILRGRAPDVA LHNEDILFIP NSAWKTAATR LQNITQLTLG AAIYSSLN