Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2584 |
Symbol | |
ID | 4070547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 3053089 |
End bp | 3053955 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637984601 |
Product | polysaccharide export protein |
Protein accession | YP_591659 |
Protein GI | 94969611 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACCC TAGCTGCGAT TCTCCTGCTT CTAAGCGCGA CCTTCCTGCG CTCTCAATCC GACGCCAACC TGACGATCGG CCCCGGCGAC CTCATCTCTA TTGATGTCTT CGATGTTTCC GAACTCAAAC AGGAGTTACG GGTCAACGAA TCCGGAGACG CCGAACTCGC CTTAGTCGGA GCGCTCCACG TCGCGAGTCT CACTCCAGAC GCCGCCTCCA CGCAGATCGC GTCTGCGCTC GAATCCCGGA GACTGGTCGT AAAACCTCAA GTCCGGGTCC TCATCCGCGA GTACGCGACT CAGGGCGCTA CGGTCTCCGG CGAAGTTCGC AAGCCAGGTA TTTACCAGAT CTACGCCCCG CGCCTTCTCT CGCAACTTAT TTCTGAAGCC GGCGGCCTTA CCGAACTCGC TTCGCCAACC GTCCGAATTA AGCGGCGCAA CGGCACCGAC GAATCCGTTC GTCTCCCGCG CAACGATAGC TCCTCGCTGA TCATGGTCTA CCCAGGTGAC ACCATCCTCG TGCAACGAGC AGGCATTACC TATCTTGTAG GCGATGTCTC GCGCTCCGGC GGATTCGTGA TGCAAAACGA TGGCGAGCTT TCCGTCGCAC AACTAGTCGC GCTTGGTGGC GGACTCGCAC CCACTGCAAA AGCCGGGCAC GCAAAGCTCG TCCGCAAGAC TCTATCCGGC CGCGAGGAAA TCGAAGTCAA TGTCGCCGAA ATCCTCCGGG GTCGTGCCCC CGACGTCGCC CTCCACAACG AGGACATCCT CTTCATTCCA AATAGCGCAT GGAAGACGGC AGCCACGCGG CTTCAGAACA TCACGCAGCT GACCCTCGGG GCAGCCATCT ACAGCAGTCT CAACTAG
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Protein sequence | MKTLAAILLL LSATFLRSQS DANLTIGPGD LISIDVFDVS ELKQELRVNE SGDAELALVG ALHVASLTPD AASTQIASAL ESRRLVVKPQ VRVLIREYAT QGATVSGEVR KPGIYQIYAP RLLSQLISEA GGLTELASPT VRIKRRNGTD ESVRLPRNDS SSLIMVYPGD TILVQRAGIT YLVGDVSRSG GFVMQNDGEL SVAQLVALGG GLAPTAKAGH AKLVRKTLSG REEIEVNVAE ILRGRAPDVA LHNEDILFIP NSAWKTAATR LQNITQLTLG AAIYSSLN
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