| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2572 |
|---|
| Symbol | sdhB |
|---|
| ID | 4070535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 3035400 |
|---|
| End bp | 3036149 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637984589 |
|---|
| Product | succinate dehydrogenase iron-sulfur subunit |
|---|
| Protein accession | YP_591647 |
|---|
| Protein GI | 94969599 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
|---|
| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAATA AGACAGTCAT CTTCAAAATC AAGCGCCAGG CCAACCCCGA TACCAAGCCG
GTATGGGAGG AGTTCGAACT CCCCTGGAAG CCGGGCATGA ACGTCATCTC CTCCCTCATG
GACATCGCGC TCAACCCGAA AACGCGCGAC GGCAAAGCGA CGACGCCGAT CACGTATGAC
TCCAATTGTC TCGAGGAGAT CTGTGGCTCA TGCGCCATGC TCATCAATGG CAAGGCACGC
ATGGCATGCT CGGCGCTCGT GGATAAACTC GAACAACCGA TCAAGCTTGA GCCGTTTTCC
AAGTTCCCGG TGGTTCGCGA TCTTTCCGTA GACCGGAGTG TTCTGTTCGA GAATCTCAAG
GCAGTGAAGG CTTGGGTTCC GATTGACGGC ACCTATGACT TGGGATCCGG CCCCAGATTG
AGCCCGGAAG AACAGGAAGT CGCCTACCCG CTGTCTAACT GCATCTCGTG TTGCTGCTGC
ATGGAAGCCT GCCCGCAATT CAATGAAAAC ACCGGCTTCG TGGGCGCCGC CGCGATATCT
CAGGTGCGGC TTTTCAATCA ACATCCCACC GGCAAGATGC TTAAGACCGA ACGTCTGCAC
GCGCTCATGG GCGACGGCGG AATCCAGGAA TGCGGCTACG CGCAAAACTG CGTGGAAGTC
TGCCCGAAAG ACATCCCGTT AACCAAGTCG ATCTCCAGCG TTGGCGGGCA GGTAATGAAG
CAGGCGATCA AGGACATCTT CACCCGCTAG
|
|---|
| Protein sequence | MANKTVIFKI KRQANPDTKP VWEEFELPWK PGMNVISSLM DIALNPKTRD GKATTPITYD
SNCLEEICGS CAMLINGKAR MACSALVDKL EQPIKLEPFS KFPVVRDLSV DRSVLFENLK
AVKAWVPIDG TYDLGSGPRL SPEEQEVAYP LSNCISCCCC MEACPQFNEN TGFVGAAAIS
QVRLFNQHPT GKMLKTERLH ALMGDGGIQE CGYAQNCVEV CPKDIPLTKS ISSVGGQVMK
QAIKDIFTR
|
|---|
| |