| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2554 |
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| Symbol | |
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| ID | 4072198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 3014982 |
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| End bp | 3016637 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637984571 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_591629 |
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| Protein GI | 94969581 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.344016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTACGTTT GGATCGCAGC CACGCTGACC GTGGCAGCGC TGCTGTGCTG GGTGGTGACT
GTCCGTCATC GCGCCACACG CCTTTCCCGG CGTATTGACG AATTGCAACG CGAAATGGGT
GTTCGCGAAT GCATCGAACG CCAACTCCAG GCCAGCCAGT CGAACCTCCA GATGGCTACG
GATGCGTCCG GTGTTGGGAC CTGGTATTGG GATTTAGCAT CCGACGAACT CTCTTGTTCT
GACCAGGCGG TAAGGCTGTT CGGACTCACG AACACTGGCA AGATCTTCAA GTCACCCGAT
TTCGTAAACG CCATTCACCC CGACGATCAG GACCGTGTTC TTGAAACGGT TGCGAACGCA
TTCCGCGAGG CGAGCAAATA TCACGTGGAG TACCGCGTCT TCCGGCCGGA TACGAGCGTC
ATATGGCTGG CCACTTCCGG CCGCGCGCTG AAAGATCCCG ATGGCGAAGT ACGACGGGTT
GCGGGCATCA CAGTGGATGT GACCGACCGA AAACGCCTGG AGGAGAGCTT CTATCAGGCG
CAGAAAATGG AAGCGGTTGG CCGACTCGCG GGTGGCGTGG CGCACGATTT CAATAACATG
CTGGGCGTCA TTTCTGCGTA TGCGGAGCTT TTGCGGGAAG AACCTAGTCT TTCTCTTCGA
GCGAGCAAAC GCGTCGACGA GATCCTGAGT GCGACCCAGC GTGCTAACGC GCTCACGCGT
CAGCTTCTTG CTTTCAGCCG GAAGCAGGTT ATCAGTCCAA CCACTCTCGA TCTGAACGCT
GTTGTATACG GCGTGAAGGA CATGCTGCAG CGGCTTGTTG GGGAAGATGT TCGCATCAGC
GTGATGGCCA CGCCCAAGCT GCCTCCGATC AAGGCGGACC GCGGTCAACT CGAGCAAGTG
CTGCTGAATT TTGCCGCCAA TTCTCGCGAT GCCATGCCCA AGGGAGGCCG CTTCACGCTT
CGGACTTCTC TCGAGCCCGC ACCTGCTGAT CTCCCGCGCC CGCTCACCGG AGACTGTGTG
TGCCTTGAGG TTTCGGATAC TGGCGACGGC ATGAGTCCCG AAGTGATGAA ACACATTTTC
GAGCCGTTCT ACACCACGAA ATCGTCGGGC AAGGGAACTG GTCTCGGCCT GGCAACGGTG
TATGGAGTGG TCGAACAGGC ACACGGCACA ATCCGCGTGG AGAGCGCGCC CGGCAAGGGA
ACTACCTTCC GCGTTTATCT GCCGGCGATG CCGGGCCAGG TCGCCGAAGC TGCCAACACG
GACATGCCGA AGGCACCAGT CTCGGTTAAG GCAAGTGTTC TGCTCGTGGA AGACGAACAA
TCGTTGCGGG AAGTCTTAAC TGAATTTATG CAGACCGCCG GAGTTCAAGT GACGGCGGTG
TCGAGCGGCC GAGAAGCGGT CGCGCGGATC AATTCCGACG CCGAAGTGGA CATTCTGCTT
ACCGACCTGG TGATGCCGGA GATGGATGGC CGCTCACTGG CTCAAATCGC GCGAACCAAG
CGTCCCAGTC TGCAAATCAT CTACATGTCG GGCCACACCA ACGACACGCT CACGCAGAAA
GAACTGGTTG CCGATGGCCT GCCTTATCTG CAGAAGCCAT TCACACGCGC CGACCTCCTC
AAAGCTTTGA CCGCTGTGCT GAAACAGACC GCTTAG
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| Protein sequence | MYVWIAATLT VAALLCWVVT VRHRATRLSR RIDELQREMG VRECIERQLQ ASQSNLQMAT
DASGVGTWYW DLASDELSCS DQAVRLFGLT NTGKIFKSPD FVNAIHPDDQ DRVLETVANA
FREASKYHVE YRVFRPDTSV IWLATSGRAL KDPDGEVRRV AGITVDVTDR KRLEESFYQA
QKMEAVGRLA GGVAHDFNNM LGVISAYAEL LREEPSLSLR ASKRVDEILS ATQRANALTR
QLLAFSRKQV ISPTTLDLNA VVYGVKDMLQ RLVGEDVRIS VMATPKLPPI KADRGQLEQV
LLNFAANSRD AMPKGGRFTL RTSLEPAPAD LPRPLTGDCV CLEVSDTGDG MSPEVMKHIF
EPFYTTKSSG KGTGLGLATV YGVVEQAHGT IRVESAPGKG TTFRVYLPAM PGQVAEAANT
DMPKAPVSVK ASVLLVEDEQ SLREVLTEFM QTAGVQVTAV SSGREAVARI NSDAEVDILL
TDLVMPEMDG RSLAQIARTK RPSLQIIYMS GHTNDTLTQK ELVADGLPYL QKPFTRADLL
KALTAVLKQT A
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