| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2529 |
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| Symbol | |
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| ID | 4072173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 2986411 |
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| End bp | 2987727 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637984546 |
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| Product | nodulation efficiency protein NfeD |
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| Protein accession | YP_591604 |
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| Protein GI | 94969556 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1030] Membrane-bound serine protease (ClpP class) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.942851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.950756 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACGCC TGTTGCTGCT TTTCGCCGCG CTCTGTATCG CCCTGCCGTC TCTCGCGCAA
GTCGTCCGCC TCAAGCTCGA CGACACCATT CAGCCGGTCT CCGAGGAATA CATCAGCCGC
GGCATCGATT ACGCCGCAGA GCACAACGCA CAGGCTGTCT TGATCGAGTT GCATACCCCC
GGCGGCCTGG TCACCTCTAC GCGCGCCATC ATCTCGAAGA TCCTTGGCTC CAAGGTTCCC
GTAATCATTT ACGTCTATCC GACAGGCGCG AATGCAGCTT CCGCGGGTTT CTTCATCCTT
GAGTCCGCCG ACATCGCCGC CATGGCGCCC GGCACCAACA CCGGCTCTGC CCATCCCGTC
TCGCTGGCCT TTGGCGTAGC GCAAACAAAG GAAGACGACA CGATGAAGGC CAAGATCGAA
AACGATCTCG CGGCCTTCCT TCGTTCATAC GTCTCCAAGC GCGGACGCAA CGTCGCTCTC
GCCGAAACCG GCGTACGCGA ATCAAAAGCC TTCTCCGACC AGGAAGCCCT CAGCCAGAAC
CTGATTGACG TCATCGCCAA AGACGAGCAG GACCTGCTCT CACAAGTGAA TGGCCGCACC
GTAAAACGTT TCGACGGCAG CACGGTCGTC ATGAAAATCG CCGCTGCTCC CATCACCGAT
TACGACCGCT CGCTCAAAGA ACGCCTCCTC GGCTTCCTCG TCGATCCCAA TATCGCGTTC
CTCATTTTCG CCATCGGCGC CATCGGTCTA TACGCGGAGT TCAATCATCC CGGCGCGATC
ATCCCCGGCG TTGTCGGAAC CGTCTGCATC CTGCTTGCGC TATTCGCGTT CCATTTCCTT
CCGATACGTT ACGCAGCCGT CACGCTCATC CTCGCCTCGT TTATCTTCTT TGCGCTCGAA
GCTAAATTCG CCACCCACGG AATTCTCGGC ATCGCCGGTA TCGCCTGCCT CGCTCTCGGT
GGCATGTTGC TGGTGGATGG TCCCATCCCC GAAATGCGCG TCAAGTGGGA AATGGCGCTC
TCTGTCTCGG TCGCCTTTGG CCTGATCACT GTCTTCCTGA TGACCATCGC CCTCCGCGCG
CGCCGCAATA AGGTGACCAC CGGCATTCAA GGCCTGCTGG GCCAGACCGG CGTCGCCCGT
TCGCCGTTAT CACCAACCGG CAAAGTTACG GTCATGGGTG AGATCTGGGA CGCCGCCTCG
CTGGTACCCG TCGCAGCCGG CGAACCGGTC GTTATACGCG GGATTGACGG GCTTACCCTG
CGCGTCGAGC CCGTCGCACA ATCTGTCGCC GCACGAGAAG TCGTATTACA GCGTTGA
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| Protein sequence | MRRLLLLFAA LCIALPSLAQ VVRLKLDDTI QPVSEEYISR GIDYAAEHNA QAVLIELHTP
GGLVTSTRAI ISKILGSKVP VIIYVYPTGA NAASAGFFIL ESADIAAMAP GTNTGSAHPV
SLAFGVAQTK EDDTMKAKIE NDLAAFLRSY VSKRGRNVAL AETGVRESKA FSDQEALSQN
LIDVIAKDEQ DLLSQVNGRT VKRFDGSTVV MKIAAAPITD YDRSLKERLL GFLVDPNIAF
LIFAIGAIGL YAEFNHPGAI IPGVVGTVCI LLALFAFHFL PIRYAAVTLI LASFIFFALE
AKFATHGILG IAGIACLALG GMLLVDGPIP EMRVKWEMAL SVSVAFGLIT VFLMTIALRA
RRNKVTTGIQ GLLGQTGVAR SPLSPTGKVT VMGEIWDAAS LVPVAAGEPV VIRGIDGLTL
RVEPVAQSVA AREVVLQR
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