Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2526 |
Symbol | |
ID | 4069895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 2982844 |
End bp | 2984178 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637984543 |
Product | NADH dehydrogenase |
Protein accession | YP_591601 |
Protein GI | 94969553 |
COG category | [C] Energy production and conversion |
COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.383895 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGGATA CGAGAAGCGC TCGCGTGGTA GTCATCGGCG GCGGCTTCGG TGGTCTCGAA ACCGTTTCCC ATCTCAAACA CCAACCGGTG CAGATCCTCC TGCTCGATCG CAAAAACCAT CACACTTTCC AGCCACTGCT CTACCAGGTC GCGACCGCAG GGCTGTCGCC GGCGGAGATC GCTGCACCGC TGCGTTCGAT CGTGTCGAAA CAGAAGAACA CTGAAGTCTT GCTCGCGGAA GTCACCGGCT TCGATCTCGC GCGCAAGATC GTGCACACTG TGGACGCAGA AATCGAATAC GACTATCTCG TCGTCGCTGC CGGAGCGCGG CATTCGTATT TTGCCCATGA CGAGTGGGAA CCTCTCGCGC CCGGGCTCAA GACCGTCGAA GACGCTCTTG AGATTCGTCG TCGCGTGCTG CTTGCGTTTG AAGAAGCAGA GCGCCAGGCC GCGCTGCACG GCCATCATCA GGACATCACG TTCGCGATCG TGGGTGGCGG ACCCACCGGG GTCGAACTCG CCGGAACAAT TTCCGAAGTC GCCCGCACCT CGCTCCCCCG TGACTTCCGC AACATCGATC CTACGCACAC GCGGGTGATT CTCATCGAAG CCGGACCGCG AGTTCTCGCT GCCTTTCCGG AAGACCTCTC GGCAAGTGCG GAACAACAGT TGCACAAACT CGGTGTGGAA GTCCGCACCA GCACAATGGT CACGCAGATC CTTCCCCACG AAATCCATAT GGGCGATGTG GTGTTGCCGA CGTCGGTTAC GCTGTGGGCT GCGGGTGTCT TTGCCTCTCC GCTCGGCCGC GCTTTAAGTG AACAAGTAGA CCGCGCCGGT CGCGTTCCCG TGCAGCCCGA CCTCACGCTT CCCAATCATC CCGAAGTCTT CGTGATCGGC GACCTCGCTA CCATCAAAAA CCCTGACGGC AAGCCGGTTC CCGGCGTCGC GCCCGCCGCC ATGCAAATGG GACGCTTCGT CGCCAAAACC ATCAGCGATG ATCTCGCCCA TCGTCCGCGC ACCAACTTCG TTTACAACGA CAAAGGTAAT CTCGCCACCA TCGGCCGCAA CGCCGCCGTC GCCCAGTTCC CTGGGTTCAA ACTGACCGGT TACTTCGCGT GGCTGTCCTG GCTCTTCATC CACATCTTGT TCCTCATCGG ATTCCGCAAT CGCCTGCTCG TAATGATCGA ATGGGCATGG TCGTACCTCA CTTACAAGCG CAGCGCACGG CTCATCACGG ATGAAGTCGG CCGCCTCCGC GAGCAACGAT CTTCGCCCGA CTCCCACAAT GCCGAAACGC CTCCTGTGGA AGTGATTGAA AGGCGAAGCG CTTAG
|
Protein sequence | MTDTRSARVV VIGGGFGGLE TVSHLKHQPV QILLLDRKNH HTFQPLLYQV ATAGLSPAEI AAPLRSIVSK QKNTEVLLAE VTGFDLARKI VHTVDAEIEY DYLVVAAGAR HSYFAHDEWE PLAPGLKTVE DALEIRRRVL LAFEEAERQA ALHGHHQDIT FAIVGGGPTG VELAGTISEV ARTSLPRDFR NIDPTHTRVI LIEAGPRVLA AFPEDLSASA EQQLHKLGVE VRTSTMVTQI LPHEIHMGDV VLPTSVTLWA AGVFASPLGR ALSEQVDRAG RVPVQPDLTL PNHPEVFVIG DLATIKNPDG KPVPGVAPAA MQMGRFVAKT ISDDLAHRPR TNFVYNDKGN LATIGRNAAV AQFPGFKLTG YFAWLSWLFI HILFLIGFRN RLLVMIEWAW SYLTYKRSAR LITDEVGRLR EQRSSPDSHN AETPPVEVIE RRSA
|
| |