| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2521 |
|---|
| Symbol | |
|---|
| ID | 4069890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 2977079 |
|---|
| End bp | 2977780 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637984538 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_591596 |
|---|
| Protein GI | 94969548 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0546] Predicted phosphatases |
|---|
| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.343798 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGAGA CTAGTACCCT GCCCGCCACG AGCGGCTTCG ATTGGCACGG CTTCGATGCC
TATTTATTCG ATATTGACGG CACCCTGCTC AACAGCCGCG ACTGGGTGCA TTACAACGCC
TTCCATACGG CGTTGCAGCA CGTCTATCAG TGTGATGCGA GGATTGATAA TGTCCCCGTT
CATGGCAATA CCGATATCGG GATCCTGCGC GCCGCCGCTG CCCTCTGCGG CGTCGGAGGC
GAACGCTTCG AGCACGGCTT GGTTGAGGCC CAGAAATTGA TGGCTGGTGA GGTCGAAAAG
CATGCCGATC AGCTTCGCCC TGAGCTCTGC CCGTCCATTC GCGAGTTGCT GGATCGATTG
CATGTCGAAG GAAAGCTGAT GGGCGTTTGC ACCGGCAACT TGCAACGGAT CGGCTGGACC
AAGCTGAAGG CTGCCGGAAT CCGCGACCGT TTCGCTGTCG GAGGCTTCAG CGATCACCAC
GAGTTTCGCG CTGACATCTT CCGCCACGCC ATGGAGCAAG CCACGAACCG TCTCGGCAGC
AACGCAAAGG CCTGCTTTAT CGGCGACACT CCCAACGACA TCCATGCCGC GCAGAAACTC
GGAATGCCGG TGGTCGCCGT CGCCACGGGC ATTTATCCAA TCGAGCAATT GCAGGCGTTG
CATCCCACGC ACTGTGTCCC GTGTTGCAAG GAGCTTCTCT AA
|
|---|
| Protein sequence | MSETSTLPAT SGFDWHGFDA YLFDIDGTLL NSRDWVHYNA FHTALQHVYQ CDARIDNVPV
HGNTDIGILR AAAALCGVGG ERFEHGLVEA QKLMAGEVEK HADQLRPELC PSIRELLDRL
HVEGKLMGVC TGNLQRIGWT KLKAAGIRDR FAVGGFSDHH EFRADIFRHA MEQATNRLGS
NAKACFIGDT PNDIHAAQKL GMPVVAVATG IYPIEQLQAL HPTHCVPCCK ELL
|
|---|
| |