| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2519 |
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| Symbol | |
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| ID | 4069888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 2974203 |
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| End bp | 2975951 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637984536 |
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| Product | alpha amylase |
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| Protein accession | YP_591594 |
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| Protein GI | 94969546 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.252753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTACT CCGCGCGCAT CGCGCTCGCC TTCTTTTCCC TATTCCTCTT CCTCCCGAAA
ATCAGTTTCG CCGTCGATCA AGCCCTCAAC GGCTACGAGC CCAAGTGGTG GAAAGAAGCA
GTTGTATACC AGGTCTATCC GCGCTCGTTC AAAGACTCCA ACGGCGATGG CATTGGCGAC
CTGAAGGGCA TCACCTCGAA GCTCGATTAC CTGCAATCGC TCGGCGTGGA CGTCATCTGG
CTGAGCCCGC ACTACGATTC CCCCAACGCC GACAACGGCT ACGACATCCG CGATTACGAG
AAAGTGATGA AGGAGTTCGG CACCATGGCC GACTTCGACG AACTTCTCAA AGGCGTGAAG
GCTCGCGGCA TGCGCCTGGT GCTCGATCTC GTGGTGAACC ACACTAGCGA CGAGCATCGC
TGGTTCGTCG AGAGCCGCAA GTCGAAGGAC AATCCGTATC GCGATTACTA CATCTGGCGC
CCCGGCAAAG ACGGTGGCCC GCCGAATAAT TACACCTCAT TCTTCTCCGG CTCCGCGTGG
ACGCTCGATC CCACGACCAA CGAGTACTAC CTGCACTGCT TCGCGGTGAA GCAGCCTGAC
TTGAACTGGG ACAACCCAAA AGTCCGCCAG GAAGTGTATT CCCTGATGAA GTTCTGGCTC
GACAAGGGCG TGGACGGATT CCGCATGGAC GTCATCCCCT TCATCTCGAA ACTGCCCGAT
CTGCCGGACA TCCCGCCCGA GTATCGCGAA CGTCCGCAGT ACTTCTACAC CCAGGGGCCG
CATCTGCATG AATATCTGCA GGAAATGAAT AAAGAGGTTC TCTCGAAGTA CGACATGATG
ACGGTCGGTG AGGCGTTCGG CGTCACGCTC GAGGGCACTC CGATGCTGGT GGATGAGCGC
CGTCACGAAC TCAACATGAT CTTCAACTTC GATGCGGTGC GAATTGGACA TCCCTCGACA
CCATGGATCG GCTGGACACT GCCAAAGCTG AAAGCGATCT ATACCGACGA AGACCAGAAG
CTGGATCAAC ACAGTTGGAA TACGGTCTTC CTGTCAAACC ACGACAATCC CCGCGTAGTC
TCTGCCTTTG GCGACGACTC TCCGGAGTGG CGCGAGAAAT CAGCGAAGCT GCTCGCGACG
ATGGTCCTCA CCCTCAAGGG CACTCCGTTC ATCTATCAGG GCGACGAACT CGGCATGACC
AATTATCCGT TCAAGGGCAT CGAGGACTTC GACGACATCG AAGTAAAGAA CGCGTGGAAG
GAATACGTGG AGACTGGACG CATCAGCAAA GAACACTTCC TCGACAACGC CCGGCGGGTG
GCACGCGACA ACTCGCGCAC TCCGATCCAG TGGGATGATT CGAGCAATGG TGGCTTCACC
ACCGGCAAGC CCTGGCTCGC GGTAAACCCG AATTACAAGA AAATCAATGC TGCAGAGGAG
CAGAAAGACA AAGACTCCGT CTACCAATAC TTCCAGCGCA TGCTGGCCTT CCGCAAGACG
ACCAAGGCTT TCAGCTACGG CGATTACAAG GACCTCGATC CGCAAAACGA AAAGATCTTC
GCCTACACGC GAACGCTCGG AAAAGAGAAG TATCTCGTCG TGCTTAATTT TTCGAAGGAT
GCGCTGAAGT ATTCCCTGCC CGGAGTGAAG GCGGGAAAAC TGGTGATGTC GAACGAAGGT
GCGGCGGAGG AGAACGCGAC CACGCTAATG ATGAAAGGCT GGGAAGCCCG GGTTTACAGA
GTCGAGTAA
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| Protein sequence | MTYSARIALA FFSLFLFLPK ISFAVDQALN GYEPKWWKEA VVYQVYPRSF KDSNGDGIGD
LKGITSKLDY LQSLGVDVIW LSPHYDSPNA DNGYDIRDYE KVMKEFGTMA DFDELLKGVK
ARGMRLVLDL VVNHTSDEHR WFVESRKSKD NPYRDYYIWR PGKDGGPPNN YTSFFSGSAW
TLDPTTNEYY LHCFAVKQPD LNWDNPKVRQ EVYSLMKFWL DKGVDGFRMD VIPFISKLPD
LPDIPPEYRE RPQYFYTQGP HLHEYLQEMN KEVLSKYDMM TVGEAFGVTL EGTPMLVDER
RHELNMIFNF DAVRIGHPST PWIGWTLPKL KAIYTDEDQK LDQHSWNTVF LSNHDNPRVV
SAFGDDSPEW REKSAKLLAT MVLTLKGTPF IYQGDELGMT NYPFKGIEDF DDIEVKNAWK
EYVETGRISK EHFLDNARRV ARDNSRTPIQ WDDSSNGGFT TGKPWLAVNP NYKKINAAEE
QKDKDSVYQY FQRMLAFRKT TKAFSYGDYK DLDPQNEKIF AYTRTLGKEK YLVVLNFSKD
ALKYSLPGVK AGKLVMSNEG AAEENATTLM MKGWEARVYR VE
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