Gene Acid345_2516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_2516 
Symbol 
ID4069885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp2972045 
End bp2972389 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content57% 
IMG OID637984533 
Productanti-sigma-factor antagonist 
Protein accessionYP_591591 
Protein GI94969543 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.206701 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCATGA AAGCAAGCTC ACGGCAGGTA AATGGCGTCA CCGTCATTGA CCTCAGCGGG 
CGTATCACCC TCGGCGAAGG TAGTGTGGTG CTGCGCGATA CCATTCGCGA CGCCGTCGCT
CAGGGCAACA AGAAAATTCT GCTCAACCTC GGCGATGTGA CCTACATCGA CAGCTCCGGT
ATTGGCGAGC TGGTCAGCGG CTTCACCTCC GTCCGCAACC AGGGCGGCGA GCTCAAGCTG
CTCAATCTGA CCAAGAAGGT CCATGACCTT CTCCAGATCA CCAAGCTTTA CACCGTCTTC
GATGTGAAAG ACGACGAAGC TACGGCGATC GCCTCCTTCA AGTAA
 
Protein sequence
MTMKASSRQV NGVTVIDLSG RITLGEGSVV LRDTIRDAVA QGNKKILLNL GDVTYIDSSG 
IGELVSGFTS VRNQGGELKL LNLTKKVHDL LQITKLYTVF DVKDDEATAI ASFK