| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2499 |
|---|
| Symbol | |
|---|
| ID | 4069868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 2955460 |
|---|
| End bp | 2956617 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637984516 |
|---|
| Product | cystathionine gamma-lyase |
|---|
| Protein accession | YP_591574 |
|---|
| Protein GI | 94969526 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.722744 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGA AAGATTCTGG GTTTTCGACG AAGTGTGTTC ACGTTGGGCA AGAACCGGAG
CAACTGACTG GTTCCGTCGG TGTTCCGATT TACGCGACCT CCACATACGC CCAGGACGAA
CTTGGCAAGC CGCGTCTCGG CTATGAGTAC TCGCGGGTGT CGAATCCAAC GCGTGATCGG
TTGGAGAAAA ACCTCGCTGC GCTTGAGGGC GGCGTAGATT CCAAGGTCTT TGCCAGCGGG
ATGGCGGCAG TGAGCGCGAT GTGCTCGCTG TTGAAGAAGG GCGACCATGT TGTTTGTTCG
TCGAACGTAT ATGGTGGCGT GCCGCGGTTG TTCAACCAGG TGCTGGTGAA TTACGGGCTG
GAGTTTACGT ACGTCGATAC GTCGGACCTG AAGGCGACCG AGAAGGCGAT CCGCAGGAGC
ACGAAGTACG TTTACATCGA GACGCCGACG AACCCTCTGA TGGTGCTGAG CGACATCGAG
GCCATCTCGC AGATCGCGCA CAAGAAGGGC ACCGAGGTTG TTGTCGATAA CACCTTCATG
TCGCCGTATT TTCAGAAGCC GATTGCCCTC GGCGCCGACA TGGTGCTGCA CTCCACGACG
AAATTCCTCA ATGGCCATAG CGACGGACTT GGCGGTGTGC TGGTCTGCAC GACGAAAGAG
CAGTCCGAGA AGCTGGCGTT CATTCAAAAA TCAGTCGGTG CGATCATGTC GCCGTTTGAA
AGTTGGCTGA TTCTGCGCGG CGTGAAGACT CTTGCCGTCC GCATGAAACA GCATGACGAG
AGCGGGCGGG TCGTCGCCGA TTTCCTCGCG AAGCAGAAGA AGATCAAGAA AGTGTTCTAT
CCGGGATTGC CAGACCATCC GCAGCACGAG CTCGCGAAGC AGCAGATGAC GGGCTTCGGC
GCGCTCATCA CATTCGAAAC CGGATCGCTC AACAACGCGA AGAAGCTTTT GAAACGAGTG
AAAGTTTGCA CGTTGGGTGA ATCGCTTGGT GGAGTGGAGA CGTTGATCTC GCATCCGGCG
ACAATGACGC ATGCTGCGCT GGGCGAAAAG GGAAGAGCGG CCATCGGACT GACCGATGGC
ATGGTGCGCA TCTCGGTCGG CATTGAGGAC GTGGAAGACC TCATCACTGA CCTGGAGCAG
GCAATTTCAG TTCTCTAG
|
|---|
| Protein sequence | MAKKDSGFST KCVHVGQEPE QLTGSVGVPI YATSTYAQDE LGKPRLGYEY SRVSNPTRDR
LEKNLAALEG GVDSKVFASG MAAVSAMCSL LKKGDHVVCS SNVYGGVPRL FNQVLVNYGL
EFTYVDTSDL KATEKAIRRS TKYVYIETPT NPLMVLSDIE AISQIAHKKG TEVVVDNTFM
SPYFQKPIAL GADMVLHSTT KFLNGHSDGL GGVLVCTTKE QSEKLAFIQK SVGAIMSPFE
SWLILRGVKT LAVRMKQHDE SGRVVADFLA KQKKIKKVFY PGLPDHPQHE LAKQQMTGFG
ALITFETGSL NNAKKLLKRV KVCTLGESLG GVETLISHPA TMTHAALGEK GRAAIGLTDG
MVRISVGIED VEDLITDLEQ AISVL
|
|---|
| |