| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2497 |
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| Symbol | |
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| ID | 4069866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 2950740 |
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| End bp | 2954246 |
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| Gene Length | 3507 bp |
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| Protein Length | 1168 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637984514 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_591572 |
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| Protein GI | 94969524 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.436801 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTCGC CAGCCACTTC AGGCGGTTTT TGGCAACAGG TCCTCGACCA ATTGCTATAC
GCCGATGTGT TGACCAAAGG ACCAGATGTC CTGGTCCTGC TTGCGGCGAC TGTTCTGGTC
TACCGGACAT TCCGGGAGAA GTACCTTTTT CCCTGGGTTT TGGGGTGGGC CGCCTACCTT
GCTTACCGGC TCCTAAGCGC TCTGCCGGCC ATCCGTATGG TGCCGGAGAT TATCTTGCTG
TCGCAGCTCT GTTACGTGGC TGCGGTTACA GGATTTTCGC TCGCGGTACT GCAGTACGTT
CGCAAGAAAT CCGCAGAGAT ATGGATTCTG GGTCTTGCGC TGGTTGCGAT CTGCGCGGTG
GCGATGCGCG CCATCTGGGG CGACAGTCGC GTGCTTCTCG TGGCGGTGAT CGTTACCACG
GCAGCGATTT GCTGGATCGC GGCGCTCCAA CTCGTTCTGT TCGCCAGCGG GCGACGCCAA
TTCGGTGCCT GGCTCATGGT ACCGATGCTC TGCGTGCTTC ACCTCGACGC AAATCCGGGA
CGCCCGCACG GTTACTCCGG ACTCGACGTC GCGATTGAGC TTTTGCTCGG GTTAAGCATG
TTGATCATCG TGCTCGACCA TTCGCGCGAG CGCACCGAAC GGCTCAGCCT GATCAACGGC
ATCACCAACA TGGTGGCACG AACCCACGAG TCCGGAACCT TGGTGGTCAG CGCGCTGGAG
CAATTGAAGA AGCATACCGG TGCCTCGTGC GCGTGGTATC GCTACATGTT GCAAGACAAG
CTGCTGATCC AGCAACAGAT TGGGCTCACG GAGCGTTACG TATCCAGCCG ACGCGTGCTG
AAACTGGATG AGAGCCACGC GGGAGCATTC ATCCATGCTG GTGCGCCCGG AACCTTTCTG
CCCTCCGAGA GCGATACCGA AACGGCGAGC TTGTTCGGCG AAATGCACGT TGCCCAGGTT
GTGGTGGTTC CCGTCAAGGG CAAGAACACC GTGACCGGTA CGATCAATCT CGGTTTGCCG
CGGAAGCGGG TGTTCTTGCC GGAAGAACTG GCGTTCCTGT CGTCCATCGC AGATCAGCTT
GGCATCGGAC TGGAAAACCA GCACATGTTC GAGCAGGTGG TTCGTTCGCA GCGCCAATGG
GTAAGCACGT TCGATTCGAT CGACGACATC ATCCTGGTGC ACGACGATGC AGGGCGCATT
ATGCGAACCA ACCGCGCGCT GCTGCAAAGG CTCGGCAAAA AAATTAACGA AGTGATCCAC
GAACCTCTCG GGTCTGTCCT ACCCAATGTC CCTCCCAAGA TCCATTGCCC TTATTGCAAT
GAACAAGATG AGGGGTACAT GGAGGGTCCA GATCCATGTT TCGGTGGCTA CTCGTTGGTG
TCGACGTCGT CCTACTCGGA AGGGGGAACG GCGGGGCTGG GCACGATCCA TATCGTGAAA
GACACAACCG AGCGTCGCGC GGCGGAGGAG CGATATCGTC TGCTGTTCGA AGAAGTTGGC
GAAGGCGTCT ACATCACCAC CGGAGATGGC CGGATCTTGG AGATGAACGA CGCATTCGTT
CGCATGCTCG GGTATGACGA TCGCCGCGAA CTCCTGAACG CCGAACTTGG AAAGAAGGTC
TACCAGAAGC CAGAGGATCG GCAACGAATC ATCGCCGAAA TTCAGGCCAA GAACCTTGTA
CGCAACTTCG AAACCAACCT GGTGCGGAAG GACGGATCGA CGCTCACCGT ACTGGAGAAC
GGTTTCGGTA CGCGCGACGC ATCGGGCAAA GTTGTTCGTT ACCAGGGCTT CGTCGTCGAC
ATTACCGAAC AGAAGCGGAT CGAGAATGAG ATCAAGCGCC GCAATCGAGA GCTCAACGCT
CTCAACACGA TTGCCGTAAT TGCCGCGCAG TCCTTCGATC TCGATGAGAT TCTTAACGTC
ACGTTGCGGC AGGTTTCGGA TTTGTTTGGC GCCGAGATGG GTTCGGTATG GATCGCGAAC
CCTGAGACGA TGACGCTGCA CGTAAGAGCT TGGGTCGGCT CCACAAGCCT CGGCGCGAAA
GTTCCGGAAA TGCAGATGTC GCAGGAACTG CTGGACGTGC TGATTGCGAA TCGGCCGGAG
TTCCTGACCA TGGAGCACCT TGGCCTTCTC CCGCCAGTGG CCCGCGAACA CCTGAATGAA
CTGGGTATCC AGACGTGGGT GTGGGTATTG CTTTGGGTTT CGGGACGTCC GCTCGGAGTG
ATCGGGTTAA GCAGTCGAAC CGTGCGCGAG TACACCGCGA TGGATCGCAA CCTGATGGTC
GCCATTGCCC GGCAGCTTGC CACTACCATC GACAAGGTCA GGCTCTACGA AGAGACAACG
CGGGCATACG AGGACTTGCG CCGCACGCAA GAACAGTTGC TCCAGAGCGA AAAGATGTCG
GCCGTGGGCC AACTGATTTC CGGTGTCGCG CACGAGCTGA ACAATCCGCT CACGGCGATC
GTTGGCTACG CACAGTTGCT CGAGCAGGAG CCACTATCGG CGCGCTCTCT CGACTTCGTA
CAAAAGCTCT ACAAACAAAC GCAGCGCACT CGCCGCGTGG TTCAGAATTT GCTCTCGTTT
GCTCGCCAGC GAAAGCCGCT TAAGCAGGAT GTTGACCTGC GACGAGTGAT CGACGAGACG
CTTGCACTGC GCGACTACGA TCTGAAGCTC AATAACATTC GTGTAGAACG GGATTTTTCG
GAAGCGTTCC CGCACGTCAT CGCCGATTCT CATCAACTGG AGCAGGTCTT CCTCAACATC
ATCAACAATG CCGTGGATGC CATGCTTGAA GGCGGCAGGG GAGGGGCGCT GCGAGTGTCG
GCCGGAATTG ACTTCGAACA TGACGCCGCC TTGGTCGAAT TTCGCGACAG CGGTCCGGGC
ATCAAGGAGC CGAAGCGCAT TTTCGATCCC TTCTACACGA CGAAAGTTGT GGGCAAGGGA
ACCGGCCTTG GGTTGAGCAT TTGTTACGGC ATCGTCAAGG AACACGGCGG GGACATCACC
GCATTCAACC ACGCCGAAGG CGGAGCAATC TTCCAGGTAC GGCTTCCGTT GACAGCTAAG
GCACGCGAGC CGCAGGTTCA GGCCCCGATC ATCTCGAGCG ACGCGCTCCG CGGCAAGGTG
CTCGCTGTGG ACGATGAAGA GGCGGTCCTT GAACTCGAGA GAGAACTCAT CACCGGCGCC
GGTGCCGACG TGACCTGCGC GTCAGACGGT GCCGAAGCAA TCCGCCTTCT CGGCGCAGAG
AGCTTTGATG CGATCGTGAT TGACAGCAAA ATGCCGGGAG AATACGACAG CCCCGATGTT
TACCGCTGGG TATTGGTAAA TCATCCTGAG CTCGCGGCAA GGTTCGTCTT TACTGTCTCG
CACGCCACCG AACCCACGGT TCGCGGGTTT CTCGAAGAGC ACTCTATTAC ACACATCGAG
AAACCTTTCC AAGTCTCTGA ATTAATTGGA ATTCTTCGAC GAATTCTGGC GTCTCGGAAA
GCCGAGACGG TGCGCGGCGC ATCCTAA
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| Protein sequence | MMSPATSGGF WQQVLDQLLY ADVLTKGPDV LVLLAATVLV YRTFREKYLF PWVLGWAAYL
AYRLLSALPA IRMVPEIILL SQLCYVAAVT GFSLAVLQYV RKKSAEIWIL GLALVAICAV
AMRAIWGDSR VLLVAVIVTT AAICWIAALQ LVLFASGRRQ FGAWLMVPML CVLHLDANPG
RPHGYSGLDV AIELLLGLSM LIIVLDHSRE RTERLSLING ITNMVARTHE SGTLVVSALE
QLKKHTGASC AWYRYMLQDK LLIQQQIGLT ERYVSSRRVL KLDESHAGAF IHAGAPGTFL
PSESDTETAS LFGEMHVAQV VVVPVKGKNT VTGTINLGLP RKRVFLPEEL AFLSSIADQL
GIGLENQHMF EQVVRSQRQW VSTFDSIDDI ILVHDDAGRI MRTNRALLQR LGKKINEVIH
EPLGSVLPNV PPKIHCPYCN EQDEGYMEGP DPCFGGYSLV STSSYSEGGT AGLGTIHIVK
DTTERRAAEE RYRLLFEEVG EGVYITTGDG RILEMNDAFV RMLGYDDRRE LLNAELGKKV
YQKPEDRQRI IAEIQAKNLV RNFETNLVRK DGSTLTVLEN GFGTRDASGK VVRYQGFVVD
ITEQKRIENE IKRRNRELNA LNTIAVIAAQ SFDLDEILNV TLRQVSDLFG AEMGSVWIAN
PETMTLHVRA WVGSTSLGAK VPEMQMSQEL LDVLIANRPE FLTMEHLGLL PPVAREHLNE
LGIQTWVWVL LWVSGRPLGV IGLSSRTVRE YTAMDRNLMV AIARQLATTI DKVRLYEETT
RAYEDLRRTQ EQLLQSEKMS AVGQLISGVA HELNNPLTAI VGYAQLLEQE PLSARSLDFV
QKLYKQTQRT RRVVQNLLSF ARQRKPLKQD VDLRRVIDET LALRDYDLKL NNIRVERDFS
EAFPHVIADS HQLEQVFLNI INNAVDAMLE GGRGGALRVS AGIDFEHDAA LVEFRDSGPG
IKEPKRIFDP FYTTKVVGKG TGLGLSICYG IVKEHGGDIT AFNHAEGGAI FQVRLPLTAK
AREPQVQAPI ISSDALRGKV LAVDDEEAVL ELERELITGA GADVTCASDG AEAIRLLGAE
SFDAIVIDSK MPGEYDSPDV YRWVLVNHPE LAARFVFTVS HATEPTVRGF LEEHSITHIE
KPFQVSELIG ILRRILASRK AETVRGAS
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