Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2469 |
Symbol | |
ID | 4072093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 2918682 |
End bp | 2921102 |
Gene Length | 2421 bp |
Protein Length | 806 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637984486 |
Product | 3-hydroxyacyl-CoA dehydrogenase |
Protein accession | YP_591544 |
Protein GI | 94969496 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.106878 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.652305 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAAGC GCATCGAGAA GGTTGCGGTT CTAGGCGCGG GGACCATGGG TGCCCGCATT GCTGCTCACT TCGCTAACGC AGGAATTCCC TCTTACTTAT TCGATATCGT TCCGCCGGAT GCAGACGGGC CAGCGCGCAA TAAGATTGCC GCGGCAGGAC TCGACGCGGC GAAGAAGTCG AAGCCGGCGG CGTTCTTCCA TCCGGATCTG GCAAAGCTCG TCACCGTCGG AAACTTTGAA GACGATCTCA AGAAACTGGG CGAGTGCGAC TGGATTATTG AAGCCGTGGT GGAGAACCTT GAGCTGAAGC GCGCACTGCT GAAGAAGGTA GAAGCGGTGC GGAAGCCGGG ATCGTTGATC ACGACGAATA CCAGCGGACT GCCGGTCAGC AAGATCAGCG AGGGCTTCAG CGAAGACTTT CGTCGCAACT GGTTTGGCAC GCACTTCTTC AATCCGCCAC GCTACATGCG ACTGCTCGAG CTGATTCCTA CTCCCGACAC AGACCCCAAG GCGATGGAAG CGGTTGCGCA TCTTGGCGAT GTGCAGCTGG GCAAAGGGAT CGTGCACGCG AAGGACACAC CGAATTTCAT CGGCAACCGG ATTGGAACGT TCTCGGTGCT GAACGTGATC CGCGTGATGC AGGAGATGGA CCTCTCGATT GAGGACGTGG ACGCGCTCAC GGGATCGGCG GTGGGCTGGC CGAAGTCGGC GACGTTCCGG ACGATCGACT TGGTGGGGCT CGACATTCTT GGGCACGTCG TGGGCAACAT GAAGCAGAAC GTGACCGACG AGCGGAGCGA TCTGCAAATT CCAGACTTCT ACAAGCAGAT GCTGGAGCGG AAGTGGCTCG GCGATAAGAC GAAGGGCGGC TTCTATAAGA AGCAGAAGGG GCCGCAGGGT GAAGAGCGGA TGGCGCTCGA TTGGAAGACG CTGGAGTATC ACCCGCGCTC CAAGCCGAAA TTCCCTGCCT TGGAAGTGGC GAAGACGATC GAAACTACGC CGGAGCGGGT GAAGGCGCTG CTCGGGCTCG ATGGCAATGG GCCGCAGAAG GGCGACAAGG CGGGGCAGTT CCTGTGGACG ACCCTGACCG AGTTATGGAC GTATGCAGCG AATCGGATCC CGGAGATCAG CGACACGATT GTGGAGATTG ATGCGGCGAT GCGCATGGGC TTCAACTGGG AGATGGGGCC GTTTGAGTTG TGGGACGCCG CCGGAGTGGA GGCGACGGTT GGGCGCATGA AGGCCGAGGG CAAGCCGGTT CCAGCGAATG TGGAGAAGCT GTTCGCTGCG GGCAAGACGC GCTGGTATGA CGATTCACCC AAAGCGCGTT CGGGGCGCTG CTACTTCGAT ATCGCGAGCG GTGAATATAA AGATGTACCG GTCGCGAACG GCGTGTGGTC GGTCGAGGTC GCGAAGAAAC AGCACAAAGT TGTTAAGAAG AATGCTGGGG CGTCGCTGGT CGATCTCGGC AACGGCGTGG GCTGCATTGA GTTCCACTCG AAGATGAATT CGCTGGGTGG CGACATCATC CAGATGGTGA GCTCGACTTT GAAGCCGGGC GGACCGGGCG ATCACTTCGA CGCGTTCGTC ATTACCAACG ATGCCGGGAA CTTCTCGGTG GGCGCGAACA TCATGATGCT GCTCATGGCG GTGCAGGAGC AGGAGTGGGA CGAGGTGGAC ATGATGATCC GCCAGTTCCA GAACATGACC GCGGCGATCA AGTTCTCGCA GAAACCGGTA GTGGTGGCGC CATTCGGAAT GACGCTGGGC GGCGGGTGCG AGATTGTGCT GCACGCTCCG GCGCGCCAGC CTCATGCGGA GTTGTATTGC GGGCTGGTGG AAGTGGGCGT CGGGTTGTTG CCGGGCGGCG GCGGATGTAA GGAGATGACG CTGCGCGCGG TGGATGCGGC GACGCGGATT CGTCCGGATG GACGCGGCGA GTCGGTGGAG ATGATGGAGG CATTCAAGAA GGCGTTTGAG ACGATCGCGA TGGCGAAGGT TTCGACGTCG GCTGTGGAGG CGAAGGGATT GGGATTCATC CATCGCGACG ACAACATCAT TATGAACCGC GAGCGCATTC TTTTTGAGGC TAAGGCCAAG GCAATCGAGA TGGTGCGCGA AGGATACAAG CCTCCGGTTC CGCGGACAGA TGTTGCGGTG CCGGGTGAGA GCGTGCTGGC GACTCTGAAG CTTGGCGTGC ACATCATGCG GCAGGGCGAG TTCATTACCG ACCACGAAGT GAAGATTGGC AACAAGGTCG CCGATGTCCT GTGCGGCGGC AACGTTACGC CGGGATCGCT GGTGAGCGAG CAGTATCTGC TGGATTTGGA GCGCGAAGGA TTTAAGTCAC TCTGCGGCGA GAAGAAGACG CAGGAAAGAA TTCAGTTCAC GTTGAAGACG GGCAAGCCGT TGAGGAACTA A
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Protein sequence | MLKRIEKVAV LGAGTMGARI AAHFANAGIP SYLFDIVPPD ADGPARNKIA AAGLDAAKKS KPAAFFHPDL AKLVTVGNFE DDLKKLGECD WIIEAVVENL ELKRALLKKV EAVRKPGSLI TTNTSGLPVS KISEGFSEDF RRNWFGTHFF NPPRYMRLLE LIPTPDTDPK AMEAVAHLGD VQLGKGIVHA KDTPNFIGNR IGTFSVLNVI RVMQEMDLSI EDVDALTGSA VGWPKSATFR TIDLVGLDIL GHVVGNMKQN VTDERSDLQI PDFYKQMLER KWLGDKTKGG FYKKQKGPQG EERMALDWKT LEYHPRSKPK FPALEVAKTI ETTPERVKAL LGLDGNGPQK GDKAGQFLWT TLTELWTYAA NRIPEISDTI VEIDAAMRMG FNWEMGPFEL WDAAGVEATV GRMKAEGKPV PANVEKLFAA GKTRWYDDSP KARSGRCYFD IASGEYKDVP VANGVWSVEV AKKQHKVVKK NAGASLVDLG NGVGCIEFHS KMNSLGGDII QMVSSTLKPG GPGDHFDAFV ITNDAGNFSV GANIMMLLMA VQEQEWDEVD MMIRQFQNMT AAIKFSQKPV VVAPFGMTLG GGCEIVLHAP ARQPHAELYC GLVEVGVGLL PGGGGCKEMT LRAVDAATRI RPDGRGESVE MMEAFKKAFE TIAMAKVSTS AVEAKGLGFI HRDDNIIMNR ERILFEAKAK AIEMVREGYK PPVPRTDVAV PGESVLATLK LGVHIMRQGE FITDHEVKIG NKVADVLCGG NVTPGSLVSE QYLLDLEREG FKSLCGEKKT QERIQFTLKT GKPLRN
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