| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2398 |
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| Symbol | |
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| ID | 4071396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 2838735 |
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| End bp | 2840255 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637984414 |
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| Product | periplasmic sensor diguanylate phophodiesterase |
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| Protein accession | YP_591473 |
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| Protein GI | 94969425 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4943] Predicted signal transduction protein containing sensor and EAL domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.625554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAAAGT CTCCCATCAC CCCAGGATCG ACAGCTCTGC TCGTCGGACT TTTGGTCTTG
CTGACGTCCT ATTTGGCCAT GGGCTCACTC GAGCGGTCGG TTGCGCGCCG GGAACTTGCG
CTGCAGGCAG CCATGATGCT TCGAGGATTT CAGGACGGCT ACCAGAATGC GCGCGCCGAC
CTGGCGAAGC TACCGTCCAT GGAAGAAATG AATTGCCGCG ATGGAATCAG TGACACGCTG
GCGCGCCTCA ATTTCGATAA CCAATACGTC CGATGGTACG GAATCGCGCA AGAGGGCAAG
GTGATCTGCC GTGGGCCACG GGTTGGCGTT GACTTGTCCG ATGCACGCTT CCATCGCATT
GATGATGAGT GGTTCCTGAT CTCGACAGAG TCGCCCACGA AAGCAAGCAA CTTGTTGCTG
GCGCAAAAAC GCGGCAACCT TTTGTATCTC GCCATGCTCG AACCCTTGCT GTTCGACTTT
ATGCATGAGG TGGATTGCAA AGCATGTGTG TCGTTCGAAT TCCTGGTGAG CGCCCAGCCG
AACGTTGAAA TGGAGTCTGC TCCCGCATCC GGCCCGTCTG TAATCCATTA CGTGGTGGAA
AAAACGCGGC TCAACGCGCA AATGAAATTC ACGCTGAATG CTACGCAGGA GTATGTGGAT
GCGTTCGCGT TCCCTGGGCG CGTACTGTCG ATGACGATCG CTGCCGCCTT CGGTCTTGTG
ATCGGACTTT CGGTGTACGG GAATTTAACA AAATACACAT CGACGGCGTT TCTCATCGAA
CAGGGCCTGA AGCGAAACGA GTTCCTTCCT TTCTATCAAC CCATTATTGA CAGTCGTGAC
GGATCGATTC TTGGGGCGGA GGCACTCGTC CGCTGGCAGC CGAAAGGCGG AAACCTTATT
CCGCCCGGGC AGTTCATTCC GTTTGCCGAA GAGAACCATT TAATTGATCC CATTACCGAC
CAATTGGAAG AGAAGGTGCT GGACGATATC AAACAATTCG GCTGGCAAGA CTCCAGTCGA
TTCGTCAGCA TTAATGCGGT CGCGGAGCAG ATAACGGACA CGCCCTTTTG TGCGAACCTG
CTGCGACGAC TCGCAGAGAA GCGCATCCCG GCGAAGAATT TCTCAGTGGA GATTACGGAG
CGGCATCAAT TCCCCGATCT CGACCGCGGG CGAGCCGCGC TGCAGTCCTT GGTAGAAGCC
GGTATCGAGA TCAAGCTCGA CGACGCAGGC ACCGGATTCG GCGGCTTTTC CTACATCCAG
GAATTGCCGA TCACCACATT GAAGATCGAC AAGATGTTCA TTGATACGCT TCGGCAAGAG
AAGCAGGACC CCAAACGCGC GGTTCTGCAG GCGATTATTG AGTTCGCAAA GACTGCCAAT
CTTCACGCAA TAGCCGAGGG TGTAGAGACC AAAGAACAAG TCAGCCAGCT GAGCGCGGCC
GGGGTCTTCG CCATACAAGG CTACGTGTAT TCCAAGCCGA TGCCGGCAGA AGAGTTCATT
CGCTGGATGA ACGCGCGCTA G
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| Protein sequence | MKKSPITPGS TALLVGLLVL LTSYLAMGSL ERSVARRELA LQAAMMLRGF QDGYQNARAD
LAKLPSMEEM NCRDGISDTL ARLNFDNQYV RWYGIAQEGK VICRGPRVGV DLSDARFHRI
DDEWFLISTE SPTKASNLLL AQKRGNLLYL AMLEPLLFDF MHEVDCKACV SFEFLVSAQP
NVEMESAPAS GPSVIHYVVE KTRLNAQMKF TLNATQEYVD AFAFPGRVLS MTIAAAFGLV
IGLSVYGNLT KYTSTAFLIE QGLKRNEFLP FYQPIIDSRD GSILGAEALV RWQPKGGNLI
PPGQFIPFAE ENHLIDPITD QLEEKVLDDI KQFGWQDSSR FVSINAVAEQ ITDTPFCANL
LRRLAEKRIP AKNFSVEITE RHQFPDLDRG RAALQSLVEA GIEIKLDDAG TGFGGFSYIQ
ELPITTLKID KMFIDTLRQE KQDPKRAVLQ AIIEFAKTAN LHAIAEGVET KEQVSQLSAA
GVFAIQGYVY SKPMPAEEFI RWMNAR
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