| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2323 |
|---|
| Symbol | |
|---|
| ID | 4071477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 2752874 |
|---|
| End bp | 2753632 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637984339 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_591398 |
|---|
| Protein GI | 94969350 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.569628 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0283599 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCGAT TTGCGAGTAC CGTCGAGTTC TACGCGCGCT GTCGAGAGCC GTATAGCAGT
GCGTTCTTCC AAACAGTAGC GACCGAACTG AAGTGGCTGG GCAGCGAGCA TCTGCTGGAT
GTGGGCTGCG GACCGGGATT GCTAACGCTT GGGTTCGCGC CATATGTGGG CGAAGCGGTT
GGGATTGATC CGGAGCCGGG AATGTTGCAA GCGGCGCACG CTGCCGCTAT GGACGCGAAG
GCCAACGTTA CGTTTCTCCA CTCGCGACTG GAGGACTTCC CTACTTCGCA ACGATTCGAC
ATCATCACCA TTGGGCGGGC GCTGCATTGG CTGAAACGCC CGGCGGCACT GCGGAAGATC
GATGAACTCT TGACGAACGA TGGCTGTGTA CTGATCTGCG GCGCGACTAC GCTGGAGAGC
GCCGAGAGTC CGTGGCTGAA GAGCTTTAAC GACACACGGC GGCGGTATGT CACGGAAGAC
GAATCCATCT ATCGCAAGAA CGGCGCGGAT TGGTTCGCGG AGACGCACTT CGTAGAAGGC
GAGTCAATCG CCGTGGTTGA CGAGCGAGAG GTCACAGTAG ACGAGTTGGT GGGGCGGGCG
CTTTCGCGGT CAAACACTTC GCCTGAGATG CTTGGCGACC GGCGGGCGGA GTTCGAGGAT
GAATTGCGCG CAGCCCTGAA GCCGTTCTCA GAAAGTGCTT CGTTGAAGGA AAAGATTGGC
TCGCGGGCCA CGGTATTCCT GCGGCACACC GCTCGGTGA
|
|---|
| Protein sequence | MGRFASTVEF YARCREPYSS AFFQTVATEL KWLGSEHLLD VGCGPGLLTL GFAPYVGEAV
GIDPEPGMLQ AAHAAAMDAK ANVTFLHSRL EDFPTSQRFD IITIGRALHW LKRPAALRKI
DELLTNDGCV LICGATTLES AESPWLKSFN DTRRRYVTED ESIYRKNGAD WFAETHFVEG
ESIAVVDERE VTVDELVGRA LSRSNTSPEM LGDRRAEFED ELRAALKPFS ESASLKEKIG
SRATVFLRHT AR
|
|---|
| |