Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2304 |
Symbol | |
ID | 4071458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 2729977 |
End bp | 2730657 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637984320 |
Product | ABC transporter, ATPase subunit |
Protein accession | YP_591379 |
Protein GI | 94969331 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.666895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.353435 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTACTT CCACCCAGCC GATAGCGACT GAAGCGACGG CAGCGGTGTC TTTAAAAGAC ATCGTCAAGT TCTTCGGGCG CTTTGTCGCG CTGCGACACG TGTCGGCGGA GTTCGAGAGC GGCAAGCTCT ACGTGATTCT CGGCGATAAC GGGGCGGGGA AGTCCACTCT GTTGCGGGTG ATGACCGGGC TGCTGAAGCC GTCTTACGGT GAAGTGAAGC TGCTGGGCGA AGCGCCTTGT GAGAGAGCAC AACGCTTTGG TTATATGGGC CACGCGCCCC TGCTCTACGA CGAACTCACT GGTGTGGAGA ACCTGTCGTA CTTCGCCGGG CTTTATGGGA TGGATGCCGA CGAGAAGGTG AAGCATGCGA TTCTCACTGT CGGCCTCGAT CCCGATCTTG ATCGGCGAGT AGGGAACTAC TCGCAGGGTA TGCGGCAGCG AATGTCGCTA GCGCGCTCGA TCATTCACAA TCCCGATGTG CTCTTCCTCG ACGAGCCGTT TTCCAACGTG GATATCAAGT CCGCACAAGA CATGGCAGCG TTGCTCGGAA CGATGCGCAA TGCAGGGAAG ACGCTGTTCG TTGTGACGCA CCAGCCTGCA GTGCTGGAGG ACGTGGCCGA CCAGTACATC GTGATGAACT CGGGGCAGAT TATCGAGCGT CGGAAGGAGT ACAAGGCATG A
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Protein sequence | MTTSTQPIAT EATAAVSLKD IVKFFGRFVA LRHVSAEFES GKLYVILGDN GAGKSTLLRV MTGLLKPSYG EVKLLGEAPC ERAQRFGYMG HAPLLYDELT GVENLSYFAG LYGMDADEKV KHAILTVGLD PDLDRRVGNY SQGMRQRMSL ARSIIHNPDV LFLDEPFSNV DIKSAQDMAA LLGTMRNAGK TLFVVTHQPA VLEDVADQYI VMNSGQIIER RKEYKA
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