| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_2292 |
|---|
| Symbol | |
|---|
| ID | 4073286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 2715795 |
|---|
| End bp | 2716577 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637984308 |
|---|
| Product | formate dehydrogenase beta subunit |
|---|
| Protein accession | YP_591367 |
|---|
| Protein GI | 94969319 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
|---|
| TIGRFAM ID | [TIGR01582] formate dehydrogenase, beta subunit, Fe-S containing |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.317566 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAG TCACTGCGTT TCTCACCGAC TCCACGTTGT GTATCGGCTG CAAGGCCTGC
GAAGTCGCCT GCAAAGAATG GAACCAGGTT GAGGCCGACG GCTACGACTG GAGCGGCTTC
TCCTACGACA ACACTGGCCA CCTTGGCCAT TCCACCTGGC GGCACGTGTC GTTTGTCGAA
CACGCGCCAG AGCCGGGCGT CGGCGGCAAC GATGCCGATC TCGCCTCGTG GGGCTTCGAA
TCCGACGTCT GCAAGCACTG CGAGAATGCC GGCTGCCTGG AGGCGTGCCC GACCGGTGCG
CTCACGCGTA CCGAATTCGG CGGCGTTTAT CTTCAATCCG ACGTCTGCAA TGGCTGCTCG
TACTGTGTGG TCTCCTGCCC ATTCGGCGTA GTGCAGAAGA ACGTGAAAGA CGGCCGCGCG
TTCAAGTGCA CATTCTGTTA CGACCGCCAG AAAGAAGGTC TGCAGCCCGC GTGCGCGAAA
ACCTGCCCAA CCGAGTCGAT CAAGTTCGGG CCGATCGAAG AGATGGAATT GATCGCGCAG
GAACGCATTA AGGAATTGAA CTCGCGCGGC ATGGACGACG TGCATTATTA CAACCCCACT
CACACCAGCG TGGGCGGAAC TCATGCGGCA TTCATCGTGC GCGGCGATCC GAAGCAATAT
AATTTGCCGC CGAATCCCGA GGTGCCTACG CAATATTTGA AAGACGGATG GACAGGCGCC
GCTATCGGCG CAGGCATTCT GCTCGCGGGT TCCATCTTTG CGTTCCTGGG GACAAAGCGA
TGA
|
|---|
| Protein sequence | MSQVTAFLTD STLCIGCKAC EVACKEWNQV EADGYDWSGF SYDNTGHLGH STWRHVSFVE
HAPEPGVGGN DADLASWGFE SDVCKHCENA GCLEACPTGA LTRTEFGGVY LQSDVCNGCS
YCVVSCPFGV VQKNVKDGRA FKCTFCYDRQ KEGLQPACAK TCPTESIKFG PIEEMELIAQ
ERIKELNSRG MDDVHYYNPT HTSVGGTHAA FIVRGDPKQY NLPPNPEVPT QYLKDGWTGA
AIGAGILLAG SIFAFLGTKR
|
|---|
| |