Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2271 |
Symbol | |
ID | 4073265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 2691564 |
End bp | 2692232 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637984287 |
Product | semialdehyde dehydrogenase, NAD - binding |
Protein accession | YP_591346 |
Protein GI | 94969298 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.26805 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAACTG TTCTAATCGC CGGCGCCTCG GGCGTAGTCG GGCGCCGCGC GCTCGATCAA CTGCTTGCGT CTGCTAACGT CGATCGCGTG ATTGCCGTCG GGCGCCGTGC GCTGCCGATG CAACACCCCA AGCTGCTCTC ACAGACTGCC GATCTGAACG ATCAATCCGA TCTCGTTGCT AAGATTCCGG AGCAGGTTGA CGTCGCGATC TGTTGCCTTG GCACCACCAT CAAGGCTGCC GGATCCCAGG AAGCGTTCCG TCGGGTGGAC CACGATGCCG TGCTGACCTT CGCCGAAGCC GCGCTCGCCA AGGGCGCTCA GCGGTTTCTT CTGGTGAGTT CCATCGGTGC GAATGCCAGT TCAGGAACCT TCTACCTCCG CATTAAGGGC GAGACGGAGG CCGATCTCGC CAAGCTCGGC TTTGCGAACC TGACCATTCT GCGACCGTCG TTCATCGATC CTCAAGGCGA GCGGGGAGAC AACCGATGGG GCGAAAGGCT GGTGCTCCCG GCGGCGCAAT TCGTGTTTTC GCTGGTCGGG AAGCACGGCC GTTATGCGCC CATCAAAGCA GAAACGGTTG GCCGGGCACT GGTGACTCTT GCCTTCGATG AGACCAGCGA GCGAGTGCGG ATTTTAGAAG GGAAGAAGCT GTTTGCGGCG GGTGAATGA
|
Protein sequence | MQTVLIAGAS GVVGRRALDQ LLASANVDRV IAVGRRALPM QHPKLLSQTA DLNDQSDLVA KIPEQVDVAI CCLGTTIKAA GSQEAFRRVD HDAVLTFAEA ALAKGAQRFL LVSSIGANAS SGTFYLRIKG ETEADLAKLG FANLTILRPS FIDPQGERGD NRWGERLVLP AAQFVFSLVG KHGRYAPIKA ETVGRALVTL AFDETSERVR ILEGKKLFAA GE
|
| |