Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_2267 |
Symbol | |
ID | 4073261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 2686480 |
End bp | 2687409 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637984283 |
Product | AraC family transcriptional regulator |
Protein accession | YP_591342 |
Protein GI | 94969294 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0404948 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGTAA CCGCTTTCGG TCAGCACAGG CTCGAAGCTA CAGCTCCGTG GGGCTTGATA CAGAAGCGGG CCGAAGAAAA AGTCACAGCT TCCGACAAAA CCCACTCACC CACAGATTTG GCGCACTTCG CCATGCTGTC GCGCGGGAAC TGCTGGCTGA GTGTGGAAGG GATTCCGAAG CCGATTCCCC TCACCGGTGG TGATTGCATT TTGCTGGCCC GGGGGACTTC GATCGTTATG CGCGACAGCC TGCGAACGCG TCCGAGGTTG AGTTTCCGCG AGATCGGGGC CAGGGCGAAA AGCAATGTCG CTCATTACGG AGGCGGTGGC GCACCGACGA CAATCGTCTG CGGGTCCTTG AGTTTCGATC GCGCCAACCT GAAGCCGATC ACTCAGTTAT TGCCGAGATT CATTCTGATT AAAGCCGATG AGGCGCGAAC GCTTGCACTT CACAAGACAA TGCAGGCGCT GGCCTCAGAA ATGGCAGAAC AGGCGCCGGG ATCGGAAGTC GTGGCGACTC GACTGGCCGA GGTTCTGTTC ATCCAGGCAC TCCGGGCGCA TATCGCGTCG GAATGGGAGT GGCGCAACCA AGGATGGCTA CGTGCAATTT TCGATCCTCA AGTAGGCGCT GCCCTGAATG CCGTTCACGA CAGTGTGAGT ACGCCCTGGA CCGTCGAATC CCTGGCCGCT GCGGCGACCA TGTCGCGCTC CGCATTCGCA GTCCGTTTTA AAGAACTACT CGGACAAACA CCCTTGGAAT ATGTAACCGA GTGGCGGATG CAGAAGGCGA TGCAGTTACT ACAGCAGCGC GACAAGAAGC TCATTGACGT TGCCCGGTCG GTCGGTTATG AATCCGACGC TGCGTTCAGT AAGGCGTTCA AGCGAGTTGT CGGGGCTAAT CCTGGCGAAT ACCTCAAGCG CGGGGCTTGA
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Protein sequence | MHVTAFGQHR LEATAPWGLI QKRAEEKVTA SDKTHSPTDL AHFAMLSRGN CWLSVEGIPK PIPLTGGDCI LLARGTSIVM RDSLRTRPRL SFREIGARAK SNVAHYGGGG APTTIVCGSL SFDRANLKPI TQLLPRFILI KADEARTLAL HKTMQALASE MAEQAPGSEV VATRLAEVLF IQALRAHIAS EWEWRNQGWL RAIFDPQVGA ALNAVHDSVS TPWTVESLAA AATMSRSAFA VRFKELLGQT PLEYVTEWRM QKAMQLLQQR DKKLIDVARS VGYESDAAFS KAFKRVVGAN PGEYLKRGA
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