Gene Acid345_2239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_2239 
Symbol 
ID4072984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp2658545 
End bp2658985 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content59% 
IMG OID637984255 
Productendoribonuclease L-PSP 
Protein accessionYP_591314 
Protein GI94969266 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.98751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.733737 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGATTG CATGCATCTC TGCTGTCTTG TTGGCGACCT TGTCGGTGTG GGCGCAACAA 
CCCACCGTCA CCCACCTGAA GTCAAAGGTC GCGCAGGAGC GCCACTTGCC CTTCAGCAGC
GGCGTAATGG TCGGCAACAC TCTCTACATC GCGGGAACCA CCGGCGTGGA GCCCGACACC
AAAGGCCCCG TCACCGCCGA ACAGGAAGCT CGCATGACCA TGGACAAGGT GAAGCAGGTC
GTCGAACAGG CCGGCATGAC CATGGACGAC ATCGTGCAAT TCCAGGTCTT CGCCACCGAC
CTCGGCAACT ACGACACGTT CAACAGCGTC TACAAAACGT ATTTCAAAGG CGACTTCCCC
GCCCGCGCGT TTCTCGGGAC AGACAAGCTT TTGTTTGGCG CGCGGTATGA AGTGATGGGG
ATCGCGGTGA AGTCAAAGTA G
 
Protein sequence
MKIACISAVL LATLSVWAQQ PTVTHLKSKV AQERHLPFSS GVMVGNTLYI AGTTGVEPDT 
KGPVTAEQEA RMTMDKVKQV VEQAGMTMDD IVQFQVFATD LGNYDTFNSV YKTYFKGDFP
ARAFLGTDKL LFGARYEVMG IAVKSK